DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluRIB and Ir7g

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster


Alignment Length:640 Identity:104/640 - (16%)
Similarity:179/640 - (27%) Gaps:317/640 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 AWEHGD-------------------KISRYL----RKVEIEGLTGDIKFNDDGRRVNYTLHVVEM 460
            :|:|.|                   |:|.:|    .:.|:.||.|.: ..:..||:|:::..  .
  Fly   195 SWKHRDYFPSKLHNLNGCPLIVLARKVSPFLDLDEGQRELRGLEGRL-LQELSRRMNFSIQF--S 256

  Fly   461 TVNSAMVKVAEWNDDAGLQPLNAK--------YVRLRPHVEFEKNRTYIVTTVLEEPYIMLKQVA 517
            .:...:.....|.:...||.|..:        |||.|  :::..|.|.:..              
  Fly   257 GLQDQLKNRTTWTEKQLLQKLVQERIAHLAIGYVRKR--IQYATNLTPVFP-------------- 305

  Fly   518 FGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADI 582
                 |.:||..| |..|                           :||.                
  Fly   306 -----HYSNRVVG-CLLL---------------------------NAHN---------------- 321

  Fly   583 AIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIV 647
             :.::.|         :|.||.:|                          .|:.::||::.:|.:
  Fly   322 -LTSLEI---------WSFPFQAL--------------------------TWICLVFSFLSISCL 350

  Fly   648 LFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPP-TPGAQTAAG 711
            .... |.:.....||                  ||       :..|.|..|..|| .|..|    
  Fly   351 ALLHXRGAGDRLALV------------------LA-------VYAASLGLPIDPPERPSLQ---- 386

  Fly   712 AAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTL 776
                                                                  :..|||..|.|
  Fly   387 ------------------------------------------------------LLFASWLIFGL 397

  Fly   777 ILISSYTANLAAFLTV---ERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWE 838
            |:.|.|:|.|...|..   :|:      |.:|...|...|..::..:|....|.           
  Fly   398 IVRSMYSALLFFILRYHLHQRL------PGNLQDLTHGDYAAVMGRTTLQDLRE----------- 445

  Fly   839 YMNSRKHVFVPTYDE--GIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIAT 901
                     ||:..:  |:|.|        ::....:.|.:...:.| |::.|.......||:.:
  Fly   446 ---------VPSLQDLLGLKSV--------IVTSEREEEVLRTLDRC-TLREGAGSHPLFFGLIS 492

  Fly   902 PLGSALKDPINLAVLTLKENG-----------ELIKLRNKWWYEK-AECSTHKDGETSHSELSLS 954
                  :|    |:|.|.:.|           ::::.:...:.:| :..::|.|    |..:|:.
  Fly   493 ------QD----ALLHLTQRGHRAGAYHIIPQDVLEQQLAIYLQKHSHLASHLD----HLVMSIR 543

  Fly   955 NV------AG-------------------------IFYILIGGL-LVSVFVAILE 977
            :|      ||                         ..|||..|| |:|:.|.|.|
  Fly   544 SVGLVHHWAGQMASERYFRSRFLYREKRIRQPDLWAVYILTAGLYLLSLVVFICE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 14/81 (17%)
ANF_receptor 55..461 CDD:279440 13/64 (20%)
PBP2_iGluR_AMPA 497..938 CDD:270433 66/458 (14%)
Lig_chan 632..967 CDD:278489 61/383 (16%)
Ir7gNP_001368933.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462548
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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