DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir7b

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster


Alignment Length:636 Identity:112/636 - (17%)
Similarity:184/636 - (28%) Gaps:245/636 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 GLQPLNAKYVRLRPHVEFEKNRTYI-------------------------VTTVLEEP---YIML 513
            ||..|:|.|.|:|...:......|:                         |..||..|   .:|:
  Fly   101 GLPSLSAIYARIRATQDLSHTLIYMSMPTDAYGEEMQATLRFLWRLSVLNVGVVLRPPGDHILMV 165

  Fly   514 KQVAFGEKLHG--------NNRFEGYCKDLA--DLLAKELGINYELRLV----KDGNYGSEKSSA 564
            ....| ..|||        .||::...|..|  |....:||..|...|.    :|..|...:...
  Fly   166 SYFPF-SALHGCQVISANVVNRYQVGTKRWASQDYFPSKLGNFYGCLLTCATWEDMPYLVWRPDG 229

  Fly   565 HGGWDGMVGELVRKEAD-IAIAAMTITAERERVI------------------DFS------KP-- 602
            .|.:.|:.|.|::..|: :..........:|.|:                  |||      ||  
  Fly   230 SGSFVGIEGALLQFMAENLNFTVGLYWMNKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSA 294

  Fly   603 ------------FMSLGISIMIKKPVKQTPGVFSFMN-PLSQEIWVSVIFSYIGVSIVLFFVSRF 654
                        |||   .||:...::.....:..:: |.:..:|.::....|...::|..:.| 
  Fly   295 GSEIPYSQSTYYFMS---HIMLVTNLQSAYSAYEKLSFPFTPLLWRAIGLVLILACLLLMLLVR- 355

  Fly   655 SPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAAL 719
                ||              | |||               ||..|                    
  Fly   356 ----WR--------------H-HHE---------------LPRNP-------------------- 366

  Fly   720 SAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLS----PRSVSGRIAAASWFFFTLILIS 780
                                    ::.|.. :..|.:|.    |:....|:...:|.|.||:|.|
  Fly   367 ------------------------YYELLV-LTMGGNLEDRWVPQRFPSRLVLLTWLFATLVLRS 406

  Fly   781 SYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKH 845
            .|.:.:...|   |..|..|.|:.:: :...|:.|:                  ::.|...:|..
  Fly   407 GYQSGMYQLL---RQDTQRNPPQTIS-EVLAQHFTI------------------QLAEVNEARIL 449

  Fly   846 VFVP-------TYDEG--------IKRVRNSKGKYALLVESPKNEYVNAREPCDTM--KVGRNLD 893
            ..:|       .|.||        :.:...|..:.|:|.......|.....|....  .|...:.
  Fly   450 ASLPELRPEQLVYLEGSELQSFPALAQQSGSSARVAILTPYEYFGYFRKVHPMSRRLHLVRERIY 514

  Fly   894 TKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHK---------------- 942
            |:.........|.|...:|..:.....:|.|    ..|..:.......|                
  Fly   515 TQQLAFYVRRHSHLVGVLNKQIQHAHTHGFL----EHWTRQYVSAVDEKDESVARIASTSYSTLD 575

  Fly   943 --DGETSHSE--------------LSLSNVAGIFYILIGGLLVSVFVAILE 977
              ||:.|.||              ||:..:|.:|::::...|.:|.|.:||
  Fly   576 GIDGDPSLSESEEDQQVAPVRQNVLSMRELAALFWLILWANLGAVVVFVLE 626

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity