DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and GRIN2A

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:1383 Identity:276/1383 - (19%)
Similarity:463/1383 - (33%) Gaps:436/1383 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RFGLKLSCLWPSFLLWLTWSSGGGGGSGVGVSAQPSLTEKIPLGAIFEQGTDEVQSAFKYAMLNH 66
            |.|.....:.|:.|:|     .|...|.......|:|...:                    ||.|
Human    55 RVGYWTLLVLPALLVW-----RGPAPSAAAEKGPPALNIAV--------------------MLGH 94

  Fly    67 NLNVSSRRFE----------LQAYVDVI----NTADAFKLSRLICNQFS---------------R 102
            :.:|:.|...          |...|:|:    |..|...|...:|:..|               .
Human    95 SHDVTERELRTLWGPEQAAGLPLDVNVVALLMNRTDPKSLITHVCDLMSGARIHGLVFGDDTDQE 159

  Fly   103 GVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLTPSSGFLDFALSMRPDYHQAIIDTIQF 167
            .|..||..:|..:|..:........|.....       .|:|.|..|..|::   .||.:     
Human   160 AVAQMLDFISSHTFVPILGIHGGASMIMADK-------DPTSTFFQFGASIQ---QQATV----- 209

  Fly   168 YGWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVK-------------RISNVSMAIEFLH 219
              ..||:..||.|     :..:...:.||...| :..||             .:..:..:.|...
Human   210 --MLKIMQDYDWH-----VFSLVTTIFPGYREF-ISFVKTTVDNSFVGWDMQNVITLDTSFEDAK 266

  Fly   220 TLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEII--EF--G 280
            |..|:.:..:..|:|.|..:.| .:::...|.|.|....:.:::..||..:   :|:|  ||  |
Human   267 TQVQLKKIHSSVILLYCSKDEA-VLILSEARSLGLTGYDFFWIVPSLVSGN---TELIPKEFPSG 327

  Fly   281 AINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKK 345
            .|:::               ||.|.            .|:.|:   :.|.:.:|..|.:.:|.| 
Human   328 LISVS---------------YDDWD------------YSLEAR---VRDGIGILTTAASSMLEK- 361

  Fly   346 PDQFRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGMASRALDC 410
                         ...:.:|.||.                              .|.|....:..
Human   362 -------------FSYIPEAKASC------------------------------YGQMERPEVPM 383

  Fly   411 NTAKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDD 475
            :|             :..::..|..:|  .|:.|.::|.:|:..|.|:.:..:....||.:|.:.
Human   384 HT-------------LHPFMVNVTWDG--KDLSFTEEGYQVHPRLVVIVLNKDREWEKVGKWENH 433

  Fly   476 AGLQPLNAKYVRLRPHVEFEKNRTYIVTTVLEE-PYIMLKQV----------------------A 517
            . |...:|.:.|.:...:.|.:..::....||| |:::::.:                      :
Human   434 T-LSLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNS 497

  Fly   518 FGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADI 582
            ..|.::.....:|:|.|:...|::.:...|:|.||.:|.:|.:.::.   |:||:||:|.:.|.:
Human   498 TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNV---WNGMIGEVVYQRAVM 559

  Fly   583 AIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIV 647
            |:.::||..||..|:|||.||:..|||:|:.:. ..|....:|:.|.|..:||.:....:.||.:
Human   560 AVGSLTINEERSEVVDFSVPFVETGISVMVSRS-NGTVSPSAFLEPFSASVWVMMFVMLLIVSAI 623

  Fly   648 LFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGA 712
            ..||..:.                 .|..::..||..:           ||.||           
Human   624 AVFVFEYF-----------------SPVGYNRNLAKGK-----------APHGP----------- 649

  Fly   713 AALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDL-SPRSVSGRIAAASWFFFTL 776
                                   .|::..:.|............: :|:..:.:|..:.|.||.:
Human   650 -----------------------SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAV 691

  Fly   777 ILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQY------GTLLHGSTWDFFRRSQIGLHNK 835
            |.::|||||||||:..|..|..:....|...|....|      ||:.:|||....|.:...:|..
Human   692 IFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQY 756

  Fly   836 MWEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAR-EPCDTMKVGRN--LDTKGF 897
            |.::  ::|.|     ::.:..::..| ..|.:.::....|...| |.|..:.:|..  ..|.|:
Human   757 MTKF--NQKGV-----EDALVSLKTGK-LDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGY 813

  Fly   898 GIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSLSNVAGIFYI 962
            |||...||..|..|:||:|....:||:.:|...|.  ...|...|: |...|:|.:.|:||:||:
Human   814 GIALQKGSPWKRQIDLALLQFVGDGEMEELETLWL--TGICHNEKN-EVMSSQLDIDNMAGVFYM 875

  Fly   963 LIGGLLVSVFVAI--------LEYCF-------------------------------RSRDSRSA 988
            |...:.:|:...|        |.:||                               :|.|....
Human   876 LAAAMALSLITFIWEHLFYWKLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFNLT 940

  Fly   989 SSGSGMGLGMGLGGGMSGGSLGKANGSMMLGPSSAV---------------PGGMPSSHQR---- 1034
            .|.|.| |.: |....:..|:...|.|.|..|..|.               .|.:..|..|    
Human   941 GSQSNM-LKL-LRSAKNISSMSNMNSSRMDSPKRAADFIQRGSLIMDMVSDKGNLMYSDNRSFQG 1003

  Fly  1035 --STLTDTMHAKAKLTIQASRDYDNGRVGYLNCASLQYYPPAQLSATPPDA-------------- 1083
              |...|.|:...  |..|:|..||     ||....|...|..|:.:.|:.              
Human  1004 KESIFGDNMNELQ--TFVANRQKDN-----LNNYVFQGQHPLTLNESNPNTVEVAVSTESKANSR 1061

  Fly  1084 -------------GDSLHMNAHGQ-----------------VXHEHAQESRLXRTPCAPTIRRIM 1118
                         .|||..|...|                 . .|....|.: .|....|..|..
Human  1062 PRQLWKKSVDSIRQDSLSQNPVSQRDEATAENRTHSLKSPRYLPEEMAHSDISETSNRATCHREP 1126

  Fly  1119 ANSRQETEKMMGGGHGGTVTVSVPATCSS------------------SMNGSHEGSLALSPSS-- 1163
            .||:....|   .....:|....|..||.                  :::|..|....|.|..  
Human  1127 DNSKNHKTK---DNFKRSVASKYPKDCSEVERTYLKTKSSSPRDKIYTIDGEKEPGFHLDPPQFV 1188

  Fly  1164 GSATLMRH--SPDINQHP 1179
            .:.||..:  .||..|.|
Human  1189 ENVTLPENVDFPDPYQDP 1206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 81/480 (17%)
ANF_receptor 55..461 CDD:279440 78/451 (17%)
PBP2_iGluR_AMPA 497..938 CDD:270433 109/473 (23%)
Lig_chan 632..967 CDD:278489 79/344 (23%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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