Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036706.1 | Gene: | Grin2b / 24410 | RGDID: | 2738 | Length: | 1482 | Species: | Rattus norvegicus |
Alignment Length: | 1165 | Identity: | 249/1165 - (21%) |
---|---|---|---|
Similarity: | 432/1165 - (37%) | Gaps: | 336/1165 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 CLWPSFLLWLTWSSGGGGGSGVGVSAQPSLTEKIP--LG-AIFEQGT-DEVQSAFKYAMLN---H 66
Fly 67 NLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFV 131
Fly 132 TPWFPEKVLTP-----------------SSGFLDFALSMRPDYHQA--IIDTIQFYGWRKIIYLY 177
Fly 178 DSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHTL--------------EQIGRFE 228
Fly 229 NKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIEF--GAINITGFRIVD 291
Fly 292 TNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRR 356
Fly 357 SQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWE 421
Fly 422 HGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLNAKYV 486
Fly 487 ---RLRPHVEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHG---------------NNRFE---- 529
Fly 530 -------GYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAM 587
Fly 588 TITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIVLFFVS 652
Fly 653 RFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQA 717
Fly 718 ALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDL-SPRSVSGRIAAASWFFFTLILISS 781
Fly 782 YTANLAAFLTVERMVTPINSPEDLAMQ------TEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYM 840
Fly 841 NSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAR-EPCD--TMKVGRNLDTKGFGIATP 902
Fly 903 LGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSLSNVAGIFYILIGGL 967
Fly 968 LVSVFVAILE--------YCFRSRDSRSASSGSGMGLGMGLGGGMSGGSLGKANGSMMLGPSSAV 1024
Fly 1025 ----------------------PGGMPSS-----HQRSTLTDTMHAKAKLTIQASRDYDN 1057 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 91/476 (19%) |
ANF_receptor | 55..461 | CDD:279440 | 81/443 (18%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 113/476 (24%) | ||
Lig_chan | 632..967 | CDD:278489 | 79/344 (23%) | ||
Grin2b | NP_036706.1 | PBP1_iGluR_NMDA_NR2 | 33..393 | CDD:107373 | 93/487 (19%) |
PBP2_iGluR_NMDA_Nr2 | 403..803 | CDD:270436 | 114/478 (24%) | ||
HisJ | <459..>542 | CDD:223904 | 34/86 (40%) | ||
Lig_chan | 557..829 | CDD:278489 | 79/344 (23%) | ||
Pore-forming. /evidence=ECO:0000269|PubMed:24876489, ECO:0000305|PubMed:24876489 | 604..623 | 1/18 (6%) |