Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_741822.2 | Gene: | glr-6 / 180955 | WormBaseID: | WBGene00001617 | Length: | 844 | Species: | Caenorhabditis elegans |
Alignment Length: | 942 | Identity: | 240/942 - (25%) |
---|---|---|---|
Similarity: | 397/942 - (42%) | Gaps: | 233/942 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 92 LSRLICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFV----TPWFPEKVLTPSSGFLDFALS 152
Fly 153 MRP--DYHQAIIDTIQFYGWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAI 215
Fly 216 EFLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIEF- 279
Fly 280 ------GAINITGFRIV----DTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVL 334
Fly 335 VEAFNKILRKKPDQ----FRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGS 395
Fly 396 DSGGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEI------EGLTGDIKFNDDGRRVNYT 454
Fly 455 LHVVEMTVNSAMVKVAEWNDD-AGLQPLN--AKYVRLRP--HVEFE----KNRTYIVTTVLEEPY 510
Fly 511 IMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGEL 575
Fly 576 VRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKP-VKQTPGVFSFMNPLSQEIWVSVIF 639
Fly 640 SYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTP 704
Fly 705 GAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAA 769
Fly 770 SWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHN 834
Fly 835 KMWEYMNSRK-HVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGR-NLDTKGF 897
Fly 898 GIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYE-KAECSTHKDGETSHSELSLSNVAGIFY 961
Fly 962 ILIGGLLVSVFVAILE---YCFRSRDSRSASS 990 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 70/413 (17%) |
ANF_receptor | 55..461 | CDD:279440 | 67/395 (17%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 148/444 (33%) | ||
Lig_chan | 632..967 | CDD:278489 | 98/337 (29%) | ||
glr-6 | NP_741822.2 | PBP1_iGluR_non_NMDA-like | 21..394 | CDD:380591 | 74/423 (17%) |
PBP2_iGluR_Kainate | 409..764 | CDD:270432 | 147/437 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |