Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001337310.1 | Gene: | glr-7 / 180547 | WormBaseID: | WBGene00001618 | Length: | 885 | Species: | Caenorhabditis elegans |
Alignment Length: | 607 | Identity: | 160/607 - (26%) |
---|---|---|---|
Similarity: | 270/607 - (44%) | Gaps: | 142/607 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 441 DIKFNDDGRRV-NYTLHVVEMTVNSAMVKV-----------AEWNDDAG----LQPLNAKYVRLR 489
Fly 490 PHVEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKD 554
Fly 555 GNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSL-GISIMIKKPVKQ 618
Fly 619 TPGVFSFMNPLSQEIWVSVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLAN 683
Fly 684 QQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLA 748
Fly 749 AFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQY 813
Fly 814 GTLLHGSTWDFFRR------------SQIGLH----------------------NKMWEYMNSRK 844
Fly 845 HVFVP-TYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALK 908
Fly 909 DPINLAVLTLKENGELIKLRNKWWYE---KAEC---STHKDGETSHSELSLSNVAGIFYILIGGL 967
Fly 968 LVSVFVAILEYCFRSRDSRSAS 989 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 12/52 (23%) |
ANF_receptor | 55..461 | CDD:279440 | 7/20 (35%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 129/479 (27%) | ||
Lig_chan | 632..967 | CDD:278489 | 94/375 (25%) | ||
glr-7 | NP_001337310.1 | Periplasmic_Binding_Protein_Type_1 | <102..>220 | CDD:324556 | |
PBP2_iGluR_putative | 373..767 | CDD:270435 | 127/469 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |