Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001254126.1 | Gene: | glr-4 / 174258 | WormBaseID: | WBGene00001615 | Length: | 951 | Species: | Caenorhabditis elegans |
Alignment Length: | 1189 | Identity: | 311/1189 - (26%) |
---|---|---|---|
Similarity: | 498/1189 - (41%) | Gaps: | 322/1189 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 AQPSLTEKIPLGAIFEQGTDEVQSAFKYAM--------------------LNHNLNVSSRRFEL- 77
Fly 78 -QAYVDVI-NTADAFKLSRLI---CNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPE 137
Fly 138 KVLTPSSG--------FLDFALSMRPDYHQAIIDTIQFYGWRKIIYLY----DSHDGLLRLQQIY 190
Fly 191 QGLRPGNESFQVELVKRISNVSMAIEFLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLG 255
Fly 256 RRTYHYLLSGLVMDDRWESEIIE------FGA---INITGFRIVDTNRRLVREFYDSWKRLDPQM 311
Fly 312 SVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNY 376
Fly 377 SASGGGGGNGGAGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEIEG-LTG 440
Fly 441 DIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLNAKYVR-----LRPHVEFEKNRTY 500
Fly 501 IVTTVLEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAH 565
Fly 566 GGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTP--GVFSFMNP 628
Fly 629 LSQEIWVSVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGA 693
Fly 694 PLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLS 758
Fly 759 PRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWD 823
Fly 824 FFRRSQIGLHNKMWEYM-NSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTMK 887
Fly 888 VGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAE---CSTHKDGETSHS 949
Fly 950 ELSLSNVAGIFYILIGGLLVSVFVAILEYCFRSRDSRSASSGSGMGLGMGLGGGMSGGSLGKANG 1014
Fly 1015 SMMLGPSSAVPGGMPSSHQRSTLTDTMHAKAKLTIQASRDYDNGRVGYLNCASLQYYPPAQLSAT 1079
Fly 1080 PPDAGDSLHMNAHGQVXHEHAQESRLXRTPCAPTIRRIMAN-----SRQETEKMMGGGHGGTVTV 1139
Fly 1140 SVPATCSSSMNGSHEGSLA 1158 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 91/482 (19%) |
ANF_receptor | 55..461 | CDD:279440 | 83/453 (18%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 168/446 (38%) | ||
Lig_chan | 632..967 | CDD:278489 | 124/338 (37%) | ||
glr-4 | NP_001254126.1 | PBP1_iGluR_Kainate | 30..385 | CDD:107377 | 92/483 (19%) |
ANF_receptor | 45..365 | CDD:279440 | 82/446 (18%) | ||
Periplasmic_Binding_Protein_Type_2 | 410..775 | CDD:304360 | 166/435 (38%) | ||
Lig_chan | 533..810 | CDD:278489 | 124/338 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.920 |