Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005165152.1 | Gene: | gria3a / 170452 | ZFINID: | ZDB-GENE-020125-5 | Length: | 903 | Species: | Danio rerio |
Alignment Length: | 963 | Identity: | 388/963 - (40%) |
---|---|---|---|
Similarity: | 526/963 - (54%) | Gaps: | 187/963 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LLWLTWSSGGGGGSGVGVSAQPSLTEKIPLGAIFEQGTDEVQSAFKYA--MLNHNLNVSSRRFEL 77
Fly 78 QAYVDVINTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLTP 142
Fly 143 SSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVKR 207
Fly 208 ISNVSMAIEFLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGR--RTYHYLLSGLVMDD 270
Fly 271 RWESEIIEFGAINITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLV 335
Fly 336 EAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGS 400
Fly 401 GGMASRALDC--NTAKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVN 463
Fly 464 SAMVKVAEWNDDAGLQPLNAKYVRLRPHVEFEK-----------------NRTYIVTTVLEEPYI 511
Fly 512 MLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELV 576
Fly 577 RKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSY 641
Fly 642 IGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGA 706
Fly 707 QTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASW 771
Fly 772 FFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKM 836
Fly 837 WEYMNSRK-HVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIA 900
Fly 901 TPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSL 953 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 129/440 (29%) |
ANF_receptor | 55..461 | CDD:279440 | 121/411 (29%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 243/441 (55%) | ||
Lig_chan | 632..967 | CDD:278489 | 170/323 (53%) | ||
gria3a | XP_005165152.1 | PBP1_iGluR_AMPA_GluR3 | 28..399 | CDD:107382 | 133/460 (29%) |
ANF_receptor | 39..382 | CDD:279440 | 121/412 (29%) | ||
PBP2_iGluR_AMPA | 415..797 | CDD:270433 | 243/441 (55%) | ||
Lig_chan | 547..810 | CDD:278489 | 170/323 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590951 | |
Domainoid | 1 | 1.000 | 371 | 1.000 | Domainoid score | I851 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37353 | |
Inparanoid | 1 | 1.050 | 698 | 1.000 | Inparanoid score | I657 |
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D89427at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | mtm6377 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.770 |