Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001074566.1 | Gene: | Grik3 / 14807 | MGIID: | 95816 | Length: | 919 | Species: | Mus musculus |
Alignment Length: | 1010 | Identity: | 327/1010 - (32%) |
---|---|---|---|
Similarity: | 501/1010 - (49%) | Gaps: | 195/1010 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 WPSFLLWLTWSSGGGGGSGVGVSAQPSLTEKIPLGAIFE-------QGTDEVQSAFKYA--MLNH 66
Fly 67 N---LNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQM 128
Fly 129 PFVTPWFPEKVLTPSSGFLDFALSMRPDY---HQAIIDTIQFYGWRKIIYLYDSHDGLLRLQQIY 190
Fly 191 QGLRPGNESFQVELVKRISNVSMAIEFLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLG 255
Fly 256 RRT--YHYLLSGLVMDDRW--ESEIIEFGAINITGFRIVDTNRRLVREFYDSW--KRLD--PQMS 312
Fly 313 VGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNYS 377
Fly 378 ASGGGGGNGGAGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEIEGLTGDI 442
Fly 443 KFN-DDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLNAKYVRLRPHV-EFEKNRTYIVTTV 505
Fly 506 LEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDG 570
Fly 571 MVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWV 635
Fly 636 SVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPG 700
Fly 701 PPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGR 765
Fly 766 IAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRSQI 830
Fly 831 GLHNKMWEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTK 895
Fly 896 GFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSLSNVAGIF 960
Fly 961 YILIGGLLVSVFVAILEYCFR-----SRDSRSASS 990 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 104/458 (23%) |
ANF_receptor | 55..461 | CDD:279440 | 96/422 (23%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 193/440 (44%) | ||
Lig_chan | 632..967 | CDD:278489 | 126/334 (38%) | ||
Grik3 | NP_001074566.1 | PBP1_iGluR_Kainate_GluR5_7 | 34..417 | CDD:107388 | 107/464 (23%) |
PBP2_iGluR_Kainate_GluR7 | 433..801 | CDD:270441 | 193/436 (44%) | ||
Glutamate binding. /evidence=ECO:0000250 | 690..692 | 1/1 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846183 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.650 |