DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir76b

DIOPT Version :10

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:XP_061511889.1 Gene:Ir76b / 1280702 VectorBaseID:AGAMI1_009346 Length:658 Species:Anopheles gambiae


Alignment Length:787 Identity:164/787 - (20%)
Similarity:271/787 - (34%) Gaps:269/787 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 AKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWN---D 474
            |:.|.:. :|||                     ...||...|..|........|:.||...   |
Mosquito    27 AERWPDK-DHGD---------------------PQRRRYGMTATVAVALAMMMMIVVATTQLGVD 69

  Fly   475 DAGLQPL------NAKYVRLRPHVEFE-KNR------------TYIVTTVLEEPYIMLKQVAFGE 520
            ..|:.|:      ..:|.:|......| |.|            |..|||:.:.|      :::..
Mosquito    70 AQGIAPVEWDGNETTEYYQLEMDASAEVKEREMQELRRRLTGTTLRVTTLQDWP------LSYTV 128

  Fly   521 KLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRK-EADIAI 584
            |::|.....|...:|.:.|.::....|||.:.:....||....|     |.|.:|:.. .||:|:
Mosquito   129 KINGTYIGAGVAFELLEFLMEKFNFTYELVMPEQNIVGSSNDMA-----GSVLQLLTNGTADMAV 188

  Fly   585 AAMTITAERERVIDFSKPFMSLGISIMIK-KPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIVL 648
            :.:.|.|:..:.|.:|.. :..|..|||. :|::...| ...:.|.::::|:.::.|.:.|..::
Mosquito   189 SFLPILADARQHIRYSTG-LDEGEWIMIMVRPMESASG-SGLLAPFNRDVWILILVSLLAVGPII 251

  Fly   649 F--FVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAG 711
            :  .:.|.     ||.:.:.|                     ||                     
Mosquito   252 YGLLILRH-----RLTKDKEQ---------------------II--------------------- 269

  Fly   712 AAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTL 776
                                     :::.:..||...|.|:||..|||...|.||..|||:.|..
Mosquito   270 -------------------------YTLPHCVWFVYGALMKQGSTLSPTGDSTRILFASWWIFIT 309

  Fly   777 ILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGS--------------------- 820
            ||.|.|||||.||||:.:...|||:.||: .:.|.|:.|:..|:                     
Mosquito   310 ILTSFYTANLTAFLTLSKFTLPINNAEDV-RRKEKQFVTIRGGAIEYAIKNRDEALNALSVLVDK 373

  Fly   821 -TWDFFRRSQIGLHNKMWEYMNSRKHVFV---PTYDEGIKRVRNSKGKYA-LLVE---SPKNE-- 875
             ..||  .:.:...:.:.:.:..:.:|||   |..|..|         || .||.   :||||  
Mosquito   374 RLVDF--TTNVNDSDTLADKVAKQNYVFVRDRPAIDHMI---------YADYLVRRKINPKNERV 427

  Fly   876 ---YVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAE 937
               |..|..|.    :.||   :.||.  |..:......:..:|.:.|.| ::|.:......|||
Mosquito   428 HCPYATATTPF----LKRN---RAFGY--PPNTEWNRIFDPELLKMVEGG-IVKYKLHDRLPKAE 482

  Fly   938 CSTHKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYCFRSRDSRSASSGSGMGLGMGLGG 1002
            ......|.|.. :|...::...:::::.|.:.|:.|...|..||..:.|                
Mosquito   483 ICPQNLGGTER-QLKNRDLVMTYFVMVTGFVTSIVVFASELGFRYLNQR---------------- 530

  Fly  1003 GMSGGSLGKANGSMMLGPSSAVPGGMPSSHQRSTLTDTMHAKAKLTIQASRDYDNGRVGYLNCAS 1067
                    |.|..:             :..|:....|......||..:        |:.||   .
Mosquito   531 --------KLNEQL-------------AQQQQQQQQDQQPTSKKLATE--------RISYL---G 563

  Fly  1068 LQY----YPPAQLSATPPDAGDSLHMNAHGQVXHEHAQESRLXRTPCAPTIRRIMANSRQETEKM 1128
            .|:    .||      ||          :.:| ..|.|:.:|           ::.:| :.|.|:
Mosquito   564 KQFTTGDSPP------PP----------YAEVFSRHQQQQQLG----------VLGDS-ERTGKL 601

  Fly  1129 MGGGHGG 1135
            ...|.||
Mosquito   602 FDDGSGG 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..480 CDD:380603 14/69 (20%)
PBP2_iGluR_AMPA 497..938 CDD:270433 110/490 (22%)
Lig_chan 630..966 CDD:459656 80/371 (22%)
Ir76bXP_061511889.1 None

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