Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009305071.2 | Gene: | grin2cb / 100333648 | ZFINID: | ZDB-GENE-100308-2 | Length: | 1328 | Species: | Danio rerio |
Alignment Length: | 1225 | Identity: | 250/1225 - (20%) |
---|---|---|---|
Similarity: | 430/1225 - (35%) | Gaps: | 329/1225 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 GTDEVQSAFKYAMLNHNLNVSSR---------RFELQAYVDVINTADAFKLSRLICNQFSRGVYS 106
Fly 107 MLGAVSPDSFDT------LHSYSNTFQMPFVTPWFPEKVLTP----SSGFLDFALSMRPDYHQAI 161
Fly 162 IDTIQFYGWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHTLEQIGR 226
Fly 227 FENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIEFGAINITGFRIVD 291
Fly 292 TNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRR 356
Fly 357 SQTLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGMASRALDCNT-AKGWVN-- 418
Fly 419 --------AWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDD 475
Fly 476 AGL----QPLNAKYVR-LRPHVEFEKNRTYIVTTVLEEPYIMLKQV--AFGEKLHG-------NN 526
Fly 527 RFE---------------GYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELV 576
Fly 577 RKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIWVSVIFSY 641
Fly 642 IGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGA 706
Fly 707 QTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDL-SPRSVSGRIAAAS 770
Fly 771 WFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQ------TEVQYGTLLHGSTWDFFRRSQ 829
Fly 830 IGLHNKMWEYMNSRKHVFVPTYDEGIKRVRNS--KGKY-ALLVESPKNEYVNAR-EPCD--TMKV 888
Fly 889 GRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSL 953
Fly 954 SNVAGIFYILIGGLLVSVFVAILEYCFR-------------------SRDSRSASSG-SGMGLGM 998
Fly 999 GLGGGMSGGSLGKANGSMMLGPSSAVPGGMPSSHQRSTLTDTMH--------AKAKLTIQASRDY 1055
Fly 1056 DNGRVGYLNCASLQYYPPAQLSATPPDAGDSLHMNAHGQVXHEHAQESRLXRTPCAPTIRRIMAN 1120
Fly 1121 SRQETEKMMGGGHGGTVTVSVPA--TCSSSMNGSHEGSLALSPSSGSATLMRHSP 1173 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 76/456 (17%) |
ANF_receptor | 55..461 | CDD:279440 | 73/435 (17%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 118/477 (25%) | ||
Lig_chan | 632..967 | CDD:278489 | 79/347 (23%) | ||
grin2cb | XP_009305071.2 | PBP1_iGluR_NMDA_NR2 | 37..396 | CDD:107373 | 77/464 (17%) |
PBP2_iGluR_NMDA_Nr2 | 407..808 | CDD:270436 | 119/479 (25%) | ||
NMDAR2_C | 845..>932 | CDD:313729 | 12/86 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170590934 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |