Protein Alignment GluRIID and GLR1.4

DIOPT Version :10

• Sequence 1: NP_651982.1
• Gene: GluRIID / 44483
• FlyBaseID: FBgn0028422
• Length: 902
• Species: Drosophila melanogaster
• Sequence 2: NP_187408.2
• Gene: GLR1.4 / 819940
• AraportID: AT3G07520
• Length: 861
• Species: Arabidopsis thaliana
• Alignment Length: 887
• Identity: 176/887 - (19%)
• Similarity: 337/887 - (37%)
• Gaps: 193/887 - (21%)

  Fly    32 QSIRLGLITDDAT---DRIRQTFEHAIS---VVNNELGVPLVGETEQVAYGNSVQAFAQLCRLMQ 90
            :.:|:||:.|..:   ..:..:...|:|   .|||.... .|....:.::|:.:||.|....|:|
plant    44 EDVRIGLVVDMGSMEGKLVTTSISMALSDFYHVNNGYRT-RVSVLSRDSHGDPLQALAAAMDLLQ 107

  Fly    91 S-GVGAVFGPAARHTASHLLNACDSKDIPFIYPHLSWGSNPDGFNL----------HPSPEDIAN 144
            : .|.|:.|..:...|.:|....:...:|.|    |....|...:|          |.:..: |.
plant   108 TEQVEALVGGQSLLEAKNLAELGEKTKVPVI----SSFQVPSSLSLAKYNYFIQATHDTSSE-AK 167

  Fly   145 ALYDIVNQFEWSRFIFCYE-SAEYLKILDHLMTRYGIKGPVIKVMRYDLNLNGNYKSVLRRIRKS 208
            .:..:.:.|:|...:..|| ..::.:.:..|:..:......|: .:.:.:::.|.:.:::::||.
plant   168 GIAALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNAIHIE-YKAEFSVSSNEECIMKQLRKF 231

  Fly   209 EDS--RIVVVGSTTGVA-ELLRQAQQVGIMNEDYTYIIGNLNLHTFDLEEY--KYSEANITGIRM 268
            :.|  ||.|...:..:| .|...|:::|:|.|.|.:|:...:::.|....|  |.....:.|.:.
plant   232 KASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARSMNNFQDTNYLAKEEMEGVIGFKS 296

  Fly   269 FSPDQEEVRDLMEKLHQELGESEPVNSGSTF------ITMEMA-----------LTYDAVRVIAE 316
            :.|..||:.:...:..:.|...|.|...|..      |...:|           ..||.:..|.|
plant   297 YIPLTEELHNFTLRWKRSLRLEEVVTRMSVCSIWAHDIAWSLARAAEVAKLPGLSVYDLLEAIPE 361

  Fly   317 TTKHLPYQPQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGF---TFDVIE 378
            :.||                                   |.::|.|.|   :.|.|   .|:::.
plant   362 SAKH-----------------------------------KGLSGDIKF---IDKKFISDKFEIVN 388

  Fly   379 LQTSGLVKVGTWEEGKDFEFQRP--------------------PQAVNFNDIDDGSLVNKTFIVL 423
            :...|...||.|..|.....:|.                    |:..:..:...|.  .|...||
plant   389 MIGRGERSVGLWNSGSFISNRRRRLSSTKALETIIWPGGSTRIPKIRSLKEKRHGK--KKKLRVL 451

  Fly   424 ISVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFR----DGGNDYGSFNKTTNS 484
            :.........|....|...|.....||.:|:.:  ...|.||:...    .|..:|.::|....:
plant   452 VPAGNITPQILEVKTDFKTGVTAATGYCIDVFE--TSILPFNYEVEYIPWPGAINYKNYNDLVYT 514

  Fly   485 TSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFSSE 549
            ....     :.:.|.|:.|:|||..|...:||::||.::|:|::..|.:    :::....|.:..
plant   515 LYSQ-----KDKYDAAVGDITITDNRSLYVDFTLPFTDMGLAVVTAKDK----SMWIIFKPLTLS 570

  Fly   550 VWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFT----INNSLWFTTGALLQQG 610
            :||.:.        .|||:  ...|.|     .||..:..:.|.:    |...|.|....|:...
plant   571 LWLTIA--------SFFIL--TGAIVW-----LIERHDNADFQGSCFQQIGTLLCFGFSTLVFAH 620

  Fly   611 SEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRT 675
            .|.....:| |.:..:|.|..||:.|:|||.|.:.:|::       .::.|..|::...:.|...
plant   621 RERLQHNMS-RFVVIVWIFAVLILTSNYTATLTSVMTVQ-------QIRGLKSNENIGFFSASIA 677

  Fly   676 GSTRNFFSTSEEPIYIKM---NEYLNAHPEMLMENNQQGVDKVKSGTKYAFLMESTSI------- 730
            .:..|...|.:.|.|..:   :::.||               :::|| .:|:::....
plant   678 ANVVNDNPTFQGPRYKGLKTADDFTNA---------------LRNGT-ISFIVDEVPYVKLFVAK 726

  Fly   731 ---EFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWWNEVGA 792
               ||..|...::|        .|:|.|..|..|...|.::.:.:|:....|..::| ||.:  .
plant   727 HPSEFVIVETESVT--------NGFGFAFQKGSPLVQKVSREIEKLRRTEKLKAIEN-WWFQ--R 780

  Fly   793 GVCSAKSDDDGPSELGVDNLSGIYVVLVIGSIISIIISILCW 834
            ...||.|:|.. ..|.|....|::::..:....::|:.::.|
plant   781 QTTSATSEDTF-HPLTVYTFRGLFMITGVSFAFALIVYLIPW 821

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIID	NP_651982.1	PBP1_iGluR_Kainate	35..400	CDD:380605	80/407 (20%)
		PBP2_iGluR_Kainate	417..788	CDD:270432	83/391 (21%)
		Lig_chan	547..819	CDD:459656	61/288 (21%)
GLR1.4	NP_187408.2	PBP1_GABAb_receptor_plant	47..410	CDD:380645	80/407 (20%)
		GluR_Plant	448..778	CDD:270404	82/388 (21%)
		Periplasmic_Binding_Protein_Type_2	476..>657	CDD:473866	50/207 (24%)