DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIID and Ir94d

DIOPT Version :9

Sequence 1:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:677 Identity:119/677 - (17%)
Similarity:237/677 - (35%) Gaps:188/677 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 DYTYIIGNLNLHTFDL----------------EEYKYSE---ANITGIRMFSPDQEEVRDLMEKL 283
            :|..::||.:....|:                |.|...|   .|:..|...:...|   |::|.|
  Fly    36 EYVLLLGNFDTTWLDILWQLPVSVLQIKEHSRETYSLLENPSHNVLTIAFVNDSPE---DILEIL 97

  Fly   284 HQELG--ESEP-----------VNSGSTFITMEMALTYDAVRVIA------ETTKHLPYQP-QML 328
            ::.|.  .::|           |||     .:|....:..::|:|      |:.....|.| .:|
  Fly    98 YRNLRMLNTQPVLLVIRKSTIRVNS-----LLEWCWHHQLLKVVAIAQDFMESLIVYSYNPFPVL 157

  Fly   329 NCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDV-IELQTSGLVKVGTWEE 392
            ...||    :.|.||                  :.||..:.....::| |.|..|.         
  Fly   158 QFIER----RLDNST------------------VIFEKRLENLHGYEVPIALGGSS--------- 191

  Fly   393 GKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVATKPYASLVESIDTLIGNNQFQGYGVDLIKE 457
                     |:.:.:.|: :|.|          :.:.|..:.::|.:        |.|...|:: 
  Fly   192 ---------PRLIVYRDL-EGKL----------IFSGPVGNFMKSFE--------QRYNCRLVQ- 227

  Fly   458 LADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMN 522
                            .|.......:....::..:..|...:|   |.....:.....:|.|...
  Fly   228 ----------------PYPFDESAISPARDLIASVQNGSVQIA---LGAIYPQVPYTGYSYPIEL 273

  Fly   523 LGIAILYVKPQKAPPA-LFSFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEP 586
            :...::...|::.|.: |:|.:  ||...:....:|.:.:||...:..||               
  Fly   274 MSWCLMMPVPEEVPHSQLYSMV--FSPMAFGITIVAMVLISLTLSMALRL--------------- 321

  Fly   587 EELENQFTINNSLWF-----TTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFL 646
                :.:.::.|.:|     ..|.|.|...|:.......:.:..:.....|::.|.|.:..:.|:
  Fly   322 ----HGYRVSFSEYFLHDSCLRGVLSQSFYEVLRAPALIKAMYLVICLLGLLITSWYNSYFSTFV 382

  Fly   647 TIENPTSPINSVKDLADNKDDV-----QYGAKRTGSTRNFFSTSEEPIYIKMNEYLNAHPEMLME 706
            |.......:.|.:.:..:...:     :|      ....|||.:.|. |..:.:....:.|.|  
  Fly   383 TSAPRFPQLTSYESIRHSNIKIVIWKPEY------EMLLFFSENMEK-YSSIFQLQEDYKEFL-- 438

  Fly   707 NNQQGVDKVKSGTKYAFL--MESTSI--EFNTVRECNLTKVGDPL---DEKGYGIAMVKNWPYRD 764
            :.:...|     |:|.::  ||..|:  |...|....|..:.|.|   ........||||..:::
  Fly   439 HLRDSFD-----TRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKE 498

  Fly   765 KFNKALLELQEQGVLARLKNKWWNE-VGAGVCSAKSDDDGPSE---LGVDNLSGI--YVVLVIGS 823
            .|::.:|::...|:|:|.::..:.| :.||....: |...|.|   :.|.:|..|  :|..::| 
  Fly   499 PFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLE-DRGHPKEFRAMKVGDLIQIWRFVGWMLG- 561

  Fly   824 IISIIISILCWCYFVYKKAKNYEVPFC 850
            :.:|:..:...|::.:|..:|.:..||
  Fly   562 LATIVFLLELICFWRHKMWQNMKYMFC 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 36/198 (18%)
ANF_receptor 46..380 CDD:279440 34/181 (19%)
PBP2_iGluR_Kainate 417..788 CDD:270432 62/388 (16%)
Lig_chan 549..819 CDD:278489 55/292 (19%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462870
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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