DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluRIID and Ir92a

DIOPT Version :9

Sequence 1:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster
Sequence 2:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster


Alignment Length:776 Identity:140/776 - (18%)
Similarity:248/776 - (31%) Gaps:209/776 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LHPSPEDIANALYDIVNQF--EWSRFIFCYESA--------EYLKILDHLMTRYGIKGPVIKVMR 189
            |.|....::..|..||.|:  |:...:..|.::        |||..|:          .|::.:.
  Fly     3 LQPLVMHLSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSALE----------LVLRELS 57

  Fly   190 YDLNLNGNYKSVLRRIRKSEDSRIVVVGS--TTGVAELLRQAQQVGIMNEDYTYIIGNLNLHTFD 252
            ..:.|.....:.|:.:...||..:..:.|  |.|...:|.|..                  |...
  Fly    58 KPIRLQWINVAFLKDLNDLEDQVMGALNSSVTEGFITILSQTH------------------HFIH 104

  Fly   253 LEEYKYSEANITGIRMFSPDQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVRVIAET 317
            ...|....||:.              |.:|.:..|.|.|   |.:..:.|::...|....::...
  Fly   105 ARYYATRNANVR--------------LKDKRYLFLCEDE---SPAELLCMDILQFYPHHLMVRPG 152

  Fly   318 TKHLPYQPQMLNCSERHDNVQPDGSTFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDVIELQTS 382
            |:..|..|     :..|.:.:..|..      |:..|.|.       :|                
  Fly   153 TETAPTGP-----TGPHPDPRRGGGA------SVSTKNKD-------DG---------------- 183

  Fly   383 GLVKVGTWEEGKDFEFQRPPQAVNF-----------NDID----DGSLVNKTF------------ 420
                    |.|...:...|.:.:||           .::|    |..|.|:||            
  Fly   184 --------EGGAGNKTTSPYRDINFELWTQKFVGAVGNLDALLLDAFLPNETFANRVELYPNKLL 240

  Fly   421 ------IVLISVATKPYASL---------VESIDTLIGNNQ--FQGYGVDLIKELADKLGFNFTF 468
                  :::.|:...||...         |:.|.....|..  |.|...:::|........:...
  Fly   241 NLQRRSLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLTFDGAEANVMKTFCQVHNCHLRV 305

  Fly   469 RDGGNDYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQ 533
            ...|.|.........|:.|||.:|.|.|.::||.  .|.:..:.:.:.|.......:.||...|.
  Fly   306 EAYGADNWGGIYDNESSDGMLGDIYEQRVEMAIG--CIYNWYDGITETSHTIARSSVTILGPAPA 368

  Fly   534 KAPPALFSFMDPFSSEVWLYL--GIAYLGVSLCF--FIIGRLSPIEWDNPYPCIEEPEELENQFT 594
            ..|....:.| ||::..||.|  .:...|..|.|  ::..||   .:...........:||    
  Fly   369 PLPSWRTNIM-PFNNRAWLVLISTLVICGTFLYFMKYVSYRL---RYSGTQVKFHHSRKLE---- 425

  Fly   595 INNSLWFTTGALLQQGS------EIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTS 653
              .|:.......:||.|      ..||:......:.|     |:.:.:.|:..|.:.||....::
  Fly   426 --KSMLDIFALFIQQPSAPLSFDRFAPRFFLATILCA-----TITLENIYSGQLKSMLTFPFYSA 483

  Fly   654 PINSVKDLADN-----------KDDVQYGAKRTGS--TRNFFSTSEEPIYIKMNEYLNAHPEMLM 705
            |:::::..|.:           ...||.....|..  .|||          ::::|........|
  Fly   484 PVDTIEKWAQSGWKWSAPSIIWVHTVQSSDLETEQILARNF----------EVHDYSYLSNVSFM 538

  Fly   706 ENNQQGVDKVKSGT-KYAFLMESTSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKA 769
            .|...|::::.||: .....:.:.::|       |...:.|.|.........::.|....:.||.
  Fly   539 PNYGFGIERLSSGSLSVGDYVSTEALE-------NRIVLHDDLYFDYTRAVSIRGWILMPELNKH 596

  Fly   770 LLELQEQGV--------LARLKNKWWNEVGAGVCSAKSDDDGPSELGVDNLSGIYVVLVIG 822
            :...||.|:        :.:..:|...||...:.:.......|..|.|.|::|...||..|
  Fly   597 IRTCQETGLYFHWELEFIDKYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFG 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 45/273 (16%)
ANF_receptor 46..380 CDD:279440 43/256 (17%)
PBP2_iGluR_Kainate 417..788 CDD:270432 79/431 (18%)
Lig_chan 549..819 CDD:278489 54/301 (18%)
Ir92aNP_001097845.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462846
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.