DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIID and Ir75c

DIOPT Version :9

Sequence 1:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster
Sequence 2:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster


Alignment Length:713 Identity:141/713 - (19%)
Similarity:261/713 - (36%) Gaps:157/713 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 CYESAEYLKILDHLMTRYGIKGPVIKVMRYDLNLNGNYKSVLRRIRKSEDSRIVVVGSTTGV--- 222
            |:...|...::: ::.:.||....|.|...| ||...:|..|       ||.:|.:|....:   
  Fly    27 CWSIKEAFPLVE-MLNQNGIFSQYIDVQNPD-NLANVHKEYL-------DSDLVRLGVFLDLGCD 82

  Fly   223 -AELLRQAQQVGIMNEDYTYIIGNLNLHTFDLEEYKYSEA-NITGIRMFSPDQEEVRDLMEKLHQ 285
             |||        :.|:.....:.|.|||..     .|.|| |.|          ::..|.|    
  Fly    83 KAEL--------VTNQSSRARLYNQNLHWL-----LYDEAGNFT----------KLTQLFE---- 120

  Fly   286 ELGESEPVNSGSTFITMEMALTYDAVRVIAETT----KHLPYQ-----PQMLNCSERHDNVQPDG 341
              |.:..:|:..|:::.|     |..|.|....    .||..:     .|.|.|:..|..|    
  Fly   121 --GANLSLNADVTYVSRE-----DEERFILHDVYNKGSHLGGKLNITVDQTLQCNRSHCQV---- 174

  Fly   342 STFRNYMRSLEIKEKTITGRIYFEGNVRKGFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVN 406
               :.|:..|.::.:           ::.......:..:.:.||.|            .|     
  Fly   175 ---KEYLSELHLRPR-----------LQHRMDLSSVTFRLAALVSV------------LP----- 208

  Fly   407 FNDIDDGSLVNKTFIVLISVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFRDG 471
                     :|.:...|:........|.::|| :.|||.        ||....:.|||...:...
  Fly   209 ---------INSSEEELLEFLNSDRDSHMDSI-SRIGNR--------LIMHTQEILGFKLHYIWC 255

  Fly   472 GNDYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAP 536
            |.  .|.........|||   ....|:|..|....:..|...:.............::..|..|.
  Fly   256 GT--WSVQDAFGGAIGML---TNESAELCTTPFVPSWNRLHYLHPMTEQAQFRAVCMFRTPHNAG 315

  Fly   537 PALFSFMDPFSSEVWL-YLG-IAYLGVSL-CFFIIGRLSPIEWDNPYPCIEEPEELENQF--TIN 596
            .....|::||...||. :.| :.:.||.| ..|.:.|    .|  ...|::        |  ::.
  Fly   316 IKAAVFLEPFMPSVWFAFAGLLIFAGVLLWMIFHLER----HW--MQRCLD--------FIPSLL 366

  Fly   597 NSLWFTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDL 661
            :|...:.||...|||.:.||:...|.........:.:|.:.||:.:.:.|......|.|.:::.|
  Fly   367 SSCLISFGAACIQGSYLMPKSAGGRLAFIAVMLTSFLMYNYYTSIVVSTLLGSPVRSNIRTIQQL 431

  Fly   662 ADNKDDVQYGAKRTGSTRNFFSTSEEP----IYIKMNEYLNAHPEMLMENNQQGVDKVKSGTKYA 722
            ||:..||  |......|:.:..:|..|    :| |........|..:..:.::||.:|:....:.
  Fly   432 ADSSLDV--GFDTVPFTKTYLVSSPRPDIRSLY-KQKVESKRDPNSVWLSPEEGVIRVRDQPGFV 493

  Fly   723 FLMESTSIEFNTVRECNLTKVGDPLDE-------KGYGIAMVKNWPYRDKFNKALLELQEQGVLA 780
            :..|: |..::.|.:..|.:....|:|       ..||:..: |..||....:..:.:.|.|:.:
  Fly   494 YTSEA-SFMYHFVEKHYLPREISDLNEIILRPESAVYGMVHL-NSTYRQLLTQLQVRMLETGITS 556

  Fly   781 RLKNKWWNEVGAGVCSAKSDDDGPSELGVDNLSGIYVVLVIGSIISIIISIL--CWCYFVYKK 841
            : :::::::......|    :....::|::..:.:::.|::...::::|.||  ||..:..||
  Fly   557 K-QSRFFSKTKLHTFS----NSFVIQVGMEYAAPLFISLLVAYFLALLILILEICWARYAKKK 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 49/249 (20%)
ANF_receptor 46..380 CDD:279440 46/232 (20%)
PBP2_iGluR_Kainate 417..788 CDD:270432 81/386 (21%)
Lig_chan 549..819 CDD:278489 56/285 (20%)
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 53/243 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462736
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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