DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIID and Ir7a

DIOPT Version :9

Sequence 1:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster
Sequence 2:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster


Alignment Length:498 Identity:87/498 - (17%)
Similarity:181/498 - (36%) Gaps:123/498 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 DVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFNDIDDGSLVNKTFIVL----ISVATKPYASLV 435
            ::|::..:||             |:...:|.:||.:          :.|    :.|:..|....|
  Fly   188 ELIDIYKNGL-------------FRHGHEARSFNRV----------LSLSGCPLQVSWYPLPPFV 229

  Fly   436 ESIDTLIGNN----------QFQGYGVDLIKELADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLK 490
                :.|||:          :..|...:|||.||....|.....:..|...| ....:..||...
  Fly   230 ----SFIGNSSDPEERAQIWRLTGIDGELIKLLASIFDFRILLEEPCNKCLS-PDIKDDCSGCFD 289

  Fly   491 EIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIA-ILYVKPQKAPPALFSFMDPFSSEVWLYL 554
            :::...:.:.|..::.:.:......|:..:....:. |:::..|..  |:.....||:..|||.|
  Fly   290 QVIISNSSILIGAMSGSHQHRSHFSFTSSYHQSSLVFIMHMSSQFG--AVAQLAVPFTVIVWLAL 352

  Fly   555 GIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTT---GALLQQGSEIAPK 616
            .::.|.:.|..::..||.....|                ..:::|...|   |..|:..|  .|:
  Fly   353 VVSSLLLVLVLWMRNRLVCGRSD----------------LASHALQVLTTLMGNPLEARS--LPR 399

  Fly   617 ALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENP-TSPI-NSVKDLADNKDDVQYGAKRTGSTR 679
            :...|.:.|.|....|::...|...|  |.:...| ..|: ..:.:|..:.              
  Fly   400 SSRLRILYAGWLLLVLVLRVVYQGKL--FDSFRLPYHKPLPTEISELIRSN-------------- 448

  Fly   680 NFFSTSEEPIYIKMN-EYLNAHPE---MLMENNQ-------QGVDKVKSGTKYAFL--ME-STSI 730
                      |..:| |||:.:|.   :|..|..       ||:.|....|..:.:  || ...:
  Fly   449 ----------YTLINQEYLDYYPRELTVLTRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMM 503

  Fly   731 EFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWWNEVGAGVC 795
            .::|.|   ||.:.:.:......|.:.::...:..|::.:.:|...|::.....::      ..|
  Fly   504 HWSTSR---LTHIKEHIFLYQMVIYLRRHSLLKFAFDRKIKQLLSAGIIGYFVREF------DAC 559

  Fly   796 SAK---SDDDGPSELGVDNLSGIYVVLVI---GSIISIIISIL 832
            ..:   .:|...:.:.:|:..|:|.:.:|   .::::.|:.:|
  Fly   560 QYRKPFEEDYEVTPIPLDSFCGLYYISLIWLSAAVVAFILELL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 3/21 (14%)
ANF_receptor 46..380 CDD:279440 1/4 (25%)
PBP2_iGluR_Kainate 417..788 CDD:270432 72/404 (18%)
Lig_chan 549..819 CDD:278489 52/291 (18%)
Ir7aNP_572406.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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