Sequence 1: | NP_651982.1 | Gene: | GluRIID / 44483 | FlyBaseID: | FBgn0028422 | Length: | 902 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579842.2 | Gene: | Grin3b / 170796 | RGDID: | 621705 | Length: | 1002 | Species: | Rattus norvegicus |
Alignment Length: | 687 | Identity: | 149/687 - (21%) |
---|---|---|---|
Similarity: | 289/687 - (42%) | Gaps: | 128/687 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 287 LGESEPVNSGSTFITMEMALTYDAVRVIAETTKHL----PYQ---PQMLNCSE-RHDNVQPDGST 343
Fly 344 FRNYMRSLEIKEKTITGRIYFEGN--VRKGFTFDVIELQTSGL-----VKVGTWEEGKDFEFQRP 401
Fly 402 PQAVNFNDIDDGSLVNKTFIVLISVATKPYASLVES----------------------IDTLIG- 443
Fly 444 --NNQF--------QGYGVDLIKELADKLGFNF-TFRDGGNDYGSFNKTTNSTSGMLKEIVEGRA 497
Fly 498 DLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFSSEVWLYLGI-AYLGV 561
Fly 562 SLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTTGALL-QQGSEIAPKALSTRTISA 625
Fly 626 IWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKD--LADNKDDVQYGAKRTGSTRNFFSTSEEP 688
Fly 689 IYIKMNEYLNAHPEMLMENNQQGVDKVKSGTK--YAFLMESTSIEFNTV--RECNLTKVGDPLDE 749
Fly 750 KGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWWNEVGAG--VCSAKSDDDGPSELGVDNL 812
Fly 813 SGIYVVLVIGSIISIIISILCWCYFVYKKAKNYEVPFCDALAEE--FRIVI----RFSENERPLK 871
Fly 872 SAQSIYSRSRNS------SQSIESLKTDSEENMPVED 902 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIID | NP_651982.1 | PBP1_iGluR_Kainate | 35..397 | CDD:107377 | 27/124 (22%) |
ANF_receptor | 46..380 | CDD:279440 | 21/102 (21%) | ||
PBP2_iGluR_Kainate | 417..788 | CDD:270432 | 94/412 (23%) | ||
Lig_chan | 549..819 | CDD:278489 | 65/279 (23%) | ||
Grin3b | NP_579842.2 | PBP1_iGluR_NMDA_NR3 | 21..405 | CDD:107372 | 31/136 (23%) |
PBP2_iGluR_NMDA_Nr3 | 414..808 | CDD:270438 | 93/410 (23%) | ||
Lig_chan | 576..842 | CDD:278489 | 66/283 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 882..910 | 3/27 (11%) | |||
Involved in the trafficking and surface expression of NMDARs. /evidence=ECO:0000250 | 951..984 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349883 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |