DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIID and LOC100334689

DIOPT Version :9

Sequence 1:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster
Sequence 2:XP_017206939.1 Gene:LOC100334689 / 100334689 -ID:- Length:991 Species:Danio rerio


Alignment Length:877 Identity:315/877 - (35%)
Similarity:494/877 - (56%) Gaps:79/877 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLIILSLSRVQAQFYG-------GNAYEASSGQSIRLGLITDDATDRIRQTFEHAISVVN-NELG 63
            |.||:.|..:|:.| |       |..:|.:.|.   :.|::.:     ...|:.|::.:| |...
Zfish    12 SAIIVVLFWIQSSF-GMPHVIRIGGIFEQTDGP---VALVSSE-----ELAFKFAVNNINRNRTL 67

  Fly    64 VP---LVGETEQVAYGNSVQAFAQLCRLMQSGVGAVFGPAARHTASHLLNACDSKDIPFIYPHLS 125
            :|   |..:.:::...:|.:|..:.|..:..||.|:|||:...:::.:.:.|::.::|.|  .:.
Zfish    68 LPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHI--QVR 130

  Fly   126 WGSNP----DGF--NLHPSPEDIANALYDIVNQFEWSRFIFCYESAEYLKILDHLM---TRYGIK 181
            |..:|    |.|  ||:|....::.|:.|:|...:|......|:.:..|..|..|:   :||.|:
Zfish   131 WKHHPMDNRDTFYANLYPDYSSLSYAILDLVQFLKWKTATVVYDDSTGLIRLQELIMAPSRYNIR 195

  Fly   182 GPVIKVMRYDLNLNGNYKSVLRRIRKSEDSRIVVVGSTTGVAELLRQAQQVGIMNEDYTYIIGNL 246
               :|:.:..:: ..:.:.:|:.:::|.:.||:...|.|..|::|:|||.:|:|.|.|.||...|
Zfish   196 ---LKIRQLPMD-TVDTRPLLKEMKRSREFRIIFDCSHTMAAQILKQAQMMGMMTEYYHYIFTTL 256

  Fly   247 NLHTFDLEEYKYSEANITGIRMFSPDQEEVRDLMEKLHQELGESEPVNSG--STFITMEMALTYD 309
            :|...:||.|::...|:||.|:.:.|..:|..::||...|.......:||  ...:|.:.|||||
Zfish   257 DLMAINLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSLERQIPPKPDSGLLEGIMTTDAALTYD 321

  Fly   310 AVRVIAETTKHLPYQPQM----LNCSERHDNVQP--DGSTFRNYMRSLEIKEK---TITGRIYFE 365
            ||.:::.:.:|   .|||    |.| .||   :|  .|..|.::     |||.   .:|||:.|.
Zfish   322 AVHIVSVSYQH---APQMTVNSLQC-HRH---KPWRFGGRFMSF-----IKESHWDGLTGRLCFN 374

  Fly   366 --GNVRKGFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVAT 428
              ..:|..|..|::.|:..||.|||.|...........|:....|..|  ||.|:: :|:.::..
Zfish   375 RTTGLRTDFDLDIVSLKEDGLQKVGKWSASGGLNITEVPRQNGMNITD--SLSNRS-LVITTILE 436

  Fly   429 KPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFR---DGGNDYGSFNKTTNSTSGMLK 490
            :||..|.:|...|:||::|:|:.:||:||||..|||::...   ||  .|| |.......:||::
Zfish   437 EPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFSYEIHLVPDG--KYG-FQDDKGQWNGMIR 498

  Fly   491 EIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSFMDPFSSEVWLYLG 555
            |::|.|||||:..||||..||:.||||.||:|.||:|||.||.......|||::|.:.::|:|:.
Zfish   499 ELMEHRADLAVAPLTITFMREKAIDFSKPFLNTGISILYRKPNSTNSGFFSFLNPMTPDIWVYIL 563

  Fly   556 IAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWFTTGALLQQGSEIAPKALST 620
            :||||||...|:|.|.||.||.:.:||....:.:||.||:.||.||..|:|:|||||:.||||||
Zfish   564 LAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDVVENNFTLLNSFWFGVGSLMQQGSELMPKALST 628

  Fly   621 RTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRTGSTRNFFSTS 685
            |.|..||||||||::||||||||||||:|...||::|..||| .:..::||..:.|:|.:||..|
Zfish   629 RIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPVDSADDLA-KQTKIEYGVVKDGATMSFFKKS 692

  Fly   686 EEPIYIKMNEYLNAHPE-MLMENNQQGVDKVKSGTKYAFLMESTSIEFNTVRECNLTKVGDPLDE 749
            ....:.||..::::... ..:::.:.|:.:|.. :.||.|||||:||:.|.|.||||:||..:|.
Zfish   693 RVSTFEKMWAFMSSRQSTSFVKSIEDGIQRVLK-SDYALLMESTTIEYVTRRNCNLTQVGGIIDS 756

  Fly   750 KGYGIAMVKNWPYRDKFNKALLELQEQGVLARLKNKWWNEVGAGVCSAKSDDDGPSELGVDNLSG 814
            |||||...|..|||||...|:|.:.|.|.|..||.|||:  |:.....:..:.||  :|:.||.|
Zfish   757 KGYGIGTPKGSPYRDKITIAILGILEDGRLHMLKEKWWS--GSSCLEDERYETGP--MGIQNLGG 817

  Fly   815 IYVVLVIGSIISIIISILCWCYFVYKKAKNYE 846
            |::||..|.::|:.::|   ..|:||..|..|
Zfish   818 IFIVLASGLVLSVFVAI---GEFIYKLRKTAE 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 107/387 (28%)
ANF_receptor 46..380 CDD:279440 99/359 (28%)
PBP2_iGluR_Kainate 417..788 CDD:270432 174/374 (47%)
Lig_chan 549..819 CDD:278489 125/270 (46%)
LOC100334689XP_017206939.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591306
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100167
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.660

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