DRSC/TRiP Functional Genomics Resources

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Protein Alignment ear and GAS41

DIOPT Version :10

Sequence 1:NP_001262595.1 Gene:ear / 44451 FlyBaseID:FBgn0026441 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_199373.1 Gene:GAS41 / 834599 AraportID:AT5G45600 Length:268 Species:Arabidopsis thaliana


Alignment Length:277 Identity:66/277 - (23%)
Similarity:113/277 - (40%) Gaps:67/277 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKVQFEIGHTSKLRSKKTPHPQAFTHDWEIYVQGVNKADISAFVEKVVFVLHESFPKPKRVVKEP 67
            :.|....|:.:....||....|  :|.|.:||:|....|||..|:||||.||.||..|.||::||
plant    44 ISVPIVYGNVAFWLGKKASEYQ--SHKWAVYVRGATNEDISVVVKKVVFQLHSSFNSPTRVIEEP 106

  Fly    68 PYAIQESGYAGFLLPVEIYFRNR--DEPKRIVYQYDLVLQSTGPP---QHHVEVKTH---IFEAP 124
            |:.:.|||:..|.:.:.::|.:.  |:|..:.:...|..:....|   :..|.|:::   :|..|
plant   107 PFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKKPVVVESYDEIVFPDP 171

  Fly   125 SEEFRTKLMRGGGVPVFGANIGAGSLARTLS------PSVGSGETAHSNEMSGVKAKGVPGTISM 183
            ||.|                     |||..:      |.:.||             ..:|..:.:
plant   172 SESF---------------------LARVQNHPALTFPRLPSG-------------YNLPAPMQV 202

  Fly   184 NSDLNTGKKHKSRSEDPGKSNAFSALFGPPITKTSVTANNMAQVPVSKHSPEAKSAAVGGKGVFH 248
            .   :||||.:..::|......|.:.         ..|:.:.|:..::...:|..|.:..:....
plant   203 E---DTGKKKRGDTKDHSLGQWFMSF---------SEADELLQLAAARQQVQAHIAKLRRQISLL 255

  Fly   249 EGREKASKDRDKSSGGD 265
            ||:.:..|     :|.|
plant   256 EGQNQTVK-----TGSD 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
earNP_001262595.1 YEATS_AF-9_like 5..134 CDD:341125 44/136 (32%)
AHD 867..927 CDD:436050
GAS41NP_199373.1 YEATS_TFIID14_like 44..175 CDD:341129 43/132 (33%)
Blue background indicates that the domain is not in the aligned region.

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