DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ear and Mllt3

DIOPT Version :9

Sequence 1:NP_001262595.1 Gene:ear / 44451 FlyBaseID:FBgn0026441 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_446170.2 Gene:Mllt3 / 114510 RGDID:620940 Length:569 Species:Rattus norvegicus


Alignment Length:933 Identity:217/933 - (23%)
Similarity:323/933 - (34%) Gaps:377/933 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AVKVQFEIGHTSKLRSKKTPHPQAFTHDWEIYVQGVNKADISAFVEKVVFVLHESFPKPKRVVKE 66
            ||:|:.|:||.:::|.|  |..:.|||||.::|:|...::|..|||||||.||||||:||||.|:
  Rat     6 AVQVKLELGHRAQVRKK--PTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVCKD 68

  Fly    67 PPYAIQESGYAGFLLPVEIYFRNRDEPKRIVYQYDLVLQSTG-PPQHHVEVKTHIFEAPSEEFRT 130
            |||.::|||||||:||:|:||:|::|||::.:.|||.|...| ||.:|:..:...|..|:|:||.
  Rat    69 PPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEGHPPVNHLRCEKLTFNNPTEDFRR 133

  Fly   131 KLMRGGGVPVFGANIGAGSLARTLSPSVGSGETAHSNEMSGVKAKGVPGTISMNSDLNTGKKHKS 195
            ||::.||.|           .|::..|..|..::.|:..|         :.|.:|..::.....|
  Rat   134 KLLKAGGDP-----------NRSIHTSSSSSSSSSSSSSS---------SSSSSSSSSSSSSSSS 178

  Fly   196 RSEDPGKSNAFSALFGPPITKTSVTANNMAQVPVSKHSPEAKSAAVGGKGVFHEGREKASKDRDK 260
            .|.....|::.|..|..|                  |.            :..|.:||.|||   
  Rat   179 SSSSSSSSSSSSTSFSKP------------------HK------------LMKEHKEKPSKD--- 210

  Fly   261 SSGGDKPREKDKKDRHGRDKDRKSSKSGDGKHERDKEKSKKDKSRDKEREREQGSGNTTSANALT 325
                                                                             
  Rat   211 ----------------------------------------------------------------- 210

  Fly   326 VATSVGTAGGLVKHTASPKPGKPNEMGAPSPKKTANDSAAGAVAPTSRSKERDEHKSV-KSESKD 389
                                                          ||     ||||. |..|:|
  Rat   211 ----------------------------------------------SR-----EHKSAFKEPSRD 224

  Fly   390 KERSSSKKSKKDKKDKDKQRDESKDKRMPKDERPGQSDSPASGNLQSAHLQQQSQVASTGKATPT 454
            ..:||...|||.|::|..:.::...|...|:.:|...:..|..||.:....||.:.|.: |..|.
  Rat   225 HNKSSKDSSKKPKENKPLKEEKIVPKMAFKEPKPMSKEPKADSNLLTVTSAQQDKKAPS-KRPPV 288

  Fly   455 SVGSNSSSSMVSNIGKQKEEATGKHSEKAAESKGDKSTSNGNATDTKKSHKHKKKEKSKDKEKER 519
            |               ..||.:.|..:|::.....||.|:........|                
  Rat   289 S---------------DSEELSAKKRKKSSSEALFKSFSSAPPLILTCS---------------- 322

  Fly   520 NDRDKDKDKERDKDKLKEREKDKQHVTGSEKSSTVDPSPKLEGASPATEGGAPDKTPVSASASSG 584
                .||.:.:||..:|..:...:..|..:|.||:.|...:..         |:.:.|..:.||.
  Rat   323 ----ADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDDIVD---------PNDSDVEENMSSK 374

  Fly   585 SKKEKHKKSKEKSSGKDEKRQREAVDKQADTKHTGKSQQSQSGQSKTPSNLDLSDMDSAQSAPDL 649
            |                                                       ||.|.:|  
  Rat   375 S-------------------------------------------------------DSEQPSP-- 382

  Fly   650 AATNALAAAAAATLQHSDSSNSSFPDLPARSSSQQKPTKGNTGSGKETKSTVKE-HKGKSKQNDK 713
                         ...|.||:|||.....|   ||.|          .:|.:|: |...:::...
  Rat   383 -------------ASSSSSSSSSFTPSQTR---QQGP----------LRSIMKDLHSDDNEEESD 421

  Fly   714 TLEKNTDKTEKPDKTPDPKVDKSEKSEKEDKKRNRRSSQS--SNSGSGAGVTGAFIEPPVKASKK 776
            ..|.|.:.:|            .|:.......|:||.|.|  |:|.|.:..:....|||      
  Rat   422 EAEDNDNDSE------------MERPVNRGGSRSRRVSLSDGSDSESSSASSPLHHEPP------ 468

  Fly   777 EQGKAAGEKSKSPSLRPPRETNSTGTGGGTPNAGAGFLAPPSSSPSNNHSAAVAASLNNNNNNNN 841
                                                   ||....:||....|.:.:        
  Rat   469 ---------------------------------------PPLLKTNNNQILEVKSPI-------- 486

  Fly   842 NNTNSNSSHSPGEMTTPGQLQLPTEYLSELQELHHKIMTLQDNEELQHVVEMIAATGCYEITHKT 906
            ..:.|:.....||        ....||.||.|||.::|||::...||.:|.:|..||.:.||:.|
  Rat   487 KQSKSDKQIKNGE--------CDKAYLDELVELHRRLMTLRERHILQQIVNLIEETGHFHITNTT 543

  Fly   907 FDFDLCKLDRGTVQRLQEFLATS 929
            ||||||.||:.||::||.:|.||
  Rat   544 FDFDLCSLDKTTVRKLQSYLETS 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
earNP_001262595.1 YEATS 27..107 CDD:281374 48/79 (61%)
Mllt3NP_446170.2 YEATS_AF-9_like 9..137 CDD:341125 67/129 (52%)
AHD 504..564 CDD:407665 31/59 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9229
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003550
OrthoInspector 1 1.000 - - otm46307
orthoMCL 1 0.900 - - OOG6_108782
Panther 1 1.100 - - LDO PTHR23195
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2426
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.000

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