DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ear and yeats2

DIOPT Version :9

Sequence 1:NP_001262595.1 Gene:ear / 44451 FlyBaseID:FBgn0026441 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_012825478.1 Gene:yeats2 / 100135359 XenbaseID:XB-GENE-5865259 Length:1238 Species:Xenopus tropicalis


Alignment Length:963 Identity:191/963 - (19%)
Similarity:300/963 - (31%) Gaps:284/963 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKVQFEIGHTSKL--RSKKTPHPQAFTHDWEIYVQGVNK-ADISAFVEKVVFVLHESFPKPKRVV 64
            ||....:|:.||.  ..|:..:.|: ||.|.:||:|..| ..|..||:||.|.||.|: ||..:|
 Frog   196 VKKTIVVGNVSKYIPPDKREENDQS-THKWMVYVRGSRKEPSIDHFVKKVWFFLHPSY-KPNDLV 258

  Fly    65 K--EPPYAIQESGYAGFLLPVEIYFRNRDEPKRIVYQYDLVLQSTGPPQHHVEVKTHIFEAPSEE 127
            :  |||:.:...|:..|.:.|:|:|:: .:.|||...::|.|..|                    
 Frog   259 EVSEPPFHLTRRGWGEFPVRVQIHFKD-SQNKRIDIIHNLKLDRT-------------------- 302

  Fly   128 FRTKLMRGGGVPVFGANIGAGSLARTLSPSVGSGETAHSNEMSGVKAKGVPGTISMNSDLNTGKK 192
             .|.|...|...|....|...||......|..|.|.|.|.             .|:.|.:.:...
 Frog   303 -YTGLQTLGAETVVEVEIYRHSLGEDFLGSQSSNECAQSE-------------ASLLSHVKSSSP 353

  Fly   193 HKSRSEDPGKSNAFSALFGPPITKTSVTANNMAQ-----VPVS-KHSPEAKSAAVGGKGVFHEGR 251
            ||...|...|..::.    |..:....|...:||     :|.| ...|...|..:..:|      
 Frog   354 HKVAHESADKEPSYY----PQPSSLERTPTKVAQRLSFGIPGSTAFQPITASCKIVPQG------ 408

  Fly   252 EKASKDRDKSSGGDKPREKDKKDRHGRDKDRKSSKSGDGKHERDKEKSKKDKSRDKEREREQGSG 316
                   ..:|..:.|                      ||..:....|.|..|         |:|
 Frog   409 -------QAASLAESP----------------------GKSFQPITMSCKIVS---------GTG 435

  Fly   317 NTTSANALTVATSVGTAGGLVKHTASPKPGKPNEMGAPSPKKTANDSAAGAVAPTSRSKERDEHK 381
            :.||.::   :||.|.:|     |.||.|........|...| ..||...|:.|......:.:.:
 Frog   436 SPTSKHS---STSQGASG-----TKSPVPKLHGTSFTPQNIK-QEDSMFAAMPPLCPIGSQPKAQ 491

  Fly   382 SVKSESKDKERSSSKKSKKDKKDKDKQRDESKDKRMPKDERPGQSDSPASGNLQSAHLQQQSQVA 446
            |.|:.:......:....|::..:..:|..|:.....|    |.|......||...|...|::...
 Frog   492 SPKTVTGGLGAFTKVIIKQEPTEPTQQLQEAPSTSQP----PLQQIVTVKGNHMVAVSPQKNLAT 552

  Fly   447 STG-KATPTSVG--------------------SNSSSSMVSNIGKQKEEATGKHSEKAAESKGDK 490
            |.| |.....||                    :.||||:...:|.::..|.|  ..||..|.|  
 Frog   553 SEGSKVVGIPVGTTVQAAIKPSVTISGGQILVAKSSSSIAKAVGSKQIVAQG--VAKAVVSSG-- 613

  Fly   491 STSNGNATDTKKSHKHKKKEKSKDKEKERNDRDKDKDKERDKDKLKEREKDKQHVTGSEKSSTVD 555
               :||..                                        .:..|.|:.::.:|.|.
 Frog   614 ---SGNVV----------------------------------------AQSSQSVSKAQVTSAVA 635

  Fly   556 PSPKLEGASPATEGGAPDKTPVSASASSGSKKEKHKKSKEKS-SGKDEKRQREAVDKQADTKHTG 619
            .....:|:..||........|..|:...|:|......||..| .||.....:.|:.:.|:|....
 Frog   636 QKAGSQGSVMATLQLPASNIPNLANLPPGTKLYLTTNSKNPSGKGKLLLIPQGAILRAANTASLQ 700

  Fly   620 KSQQSQSGQS--------------------KTPSNLDLSDMDSAQSAPDLAATNALAAAAAATLQ 664
            ....|..|.|                    :||....|....|.|::...||.|.:.....||  
 Frog   701 SGASSSGGSSTASTTSGLPQHLTYTSYILKQTPQGTFLVGQQSQQASGKQAAANVIVQGNVAT-- 763

  Fly   665 HSDSSNSSFPDLPARSSSQQKPTKGNTG-SGKETKSTVKEHKGKSKQNDKTLEKNTDKTEKPDKT 728
                           |:...:..|..|| .|.....|.......:|.:|..:.....:|:||..|
 Frog   764 ---------------SAQGHQTLKLTTGPKGTLVAQTHSASAAVAKISDGAVTSVQSQTQKPGTT 813

  Fly   729 ----------------PDPKVDKSEKSEKEDKKRNRRSSQSSNSGSGAGVTGAF--------IEP 769
                            |....:.|.:...:....:.....:||......|....        ::|
 Frog   814 LLRVAGGVITASSASLPSVSTNVSTQQAADVSSTSTTQVSASNKSISQQVMARIAHVKSLGTVKP 878

  Fly   770 PVKASKKEQGKAAGEKSKSPS-----LRPPRETNSTGTGGGTPNAGAGFLAPPSSSPSNNHSAAV 829
            ...|:.....:.|...::|.:     :.|...:|::.|.|           |.||:|.       
 Frog   879 ATSAAAVSSTRTAPTLAQSSAASAVKMEPDMTSNASSTSG-----------PGSSTPV------- 925

  Fly   830 AASLNNNNNNNNNNTNSNSSHSPGEMTTPGQLQLP--------TEYLSELQEL 874
                         .|..:....|..:...||::..        ||:|...::|
 Frog   926 -------------KTEESGESDPSSVRVVGQVECASLRARHNWTEHLQNFKQL 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
earNP_001262595.1 YEATS 27..107 CDD:281374 32/82 (39%)
yeats2XP_012825478.1 YEATS 221..300 CDD:281374 31/80 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482359at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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