DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AT1G35710

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_174809.1 Gene:AT1G35710 / 840475 AraportID:AT1G35710 Length:1120 Species:Arabidopsis thaliana


Alignment Length:1014 Identity:219/1014 - (21%)
Similarity:382/1014 - (37%) Gaps:280/1014 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VPEEILRYSRTLEELFLDANHIR-DLPKNFFRLHRLRKLGLSDNEI-GRLPPDIQNFENLVELDV 90
            :|.| |....::.:|.|..|.:. .:|.:...|..|..|.|.:|.: |.:||::.|.|::.:|.:
plant   166 IPSE-LGNMESMTDLALSQNKLTGSIPSSLGNLKNLMVLYLYENYLTGVIPPELGNMESMTDLAL 229

  Fly    91 SRN----DIPD---------------------IPDDIKHLQSLQVADFSSNPIP-KLPSGFSQLK 129
            |:|    .||.                     ||.:|.:::|:.....|.|.:. .:||....||
plant   230 SQNKLTGSIPSTLGNLKNLMVLYLYENYLTGVIPPEIGNMESMTNLALSQNKLTGSIPSSLGNLK 294

  Fly   130 NLTVLGLNDMSLT-TLPADFGSLTQLESLELREN-LLKHLPETISQLTKLKRLDLGDNEIED-LP 191
            |||:|.|....|| .:|...|::..:..|||..| |...:|.::..|..|..|.|.:|.:.. :|
plant   295 NLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIP 359

  Fly   192 PYLGYLPGLHELWLDHNQLQ-RLPPELGLLTKLTYLDVSENRLE-ELPNEISGLVSLTDLDLAQN 254
            |.||.:..:.:|.|::|:|. .:|...|.|..||||.:..|.|. .:|.|:..:.|:.:|||:||
plant   360 PELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLTGVIPQELGNMESMINLDLSQN 424

  Fly   255 -LLEALPDGIAKLSRLTILKLDQNRLQ-RLNDTLGNCENMQELIL-TENFLSELPASIGQMTKLN 316
             |..::||.....::|..|.|..|.|. .:...:.|..::..||| |.||....|.::.:..||.
plant   425 KLTGSVPDSFGNFTKLESLYLRVNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQ 489

  Fly   317 NLNVDRNALE-YLPLEIGQCAN------------------------------------------- 337
            |:::|.|.|| .:|..:..|.:                                           
plant   490 NISLDYNHLEGPIPKSLRDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNW 554

  Fly   338 -----LGVLSLRDNKLK-KLPPELGNCTVLHVLDVSGNQLL-YLPYSLVNL-QLKAVWLSENQSQ 394
                 ||.|.:.:|.:. .:|.|:.|.|.|..||:|.|.|. .||.::.|| .|..:.|:.||..
plant   555 EKSPKLGALIMSNNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLS 619

  Fly   395 ---PL-LTFQPDTDA-ETGEQVLSCYLLPQQEYQPITPARDLESDSEPFEEREPSRTVVKFSEEA 454
               |. |:|..:.:: :......|..:  .|.:.......|:......|:...|..:        
plant   620 GRVPAGLSFLTNLESLDLSSNNFSSEI--PQTFDSFLKLHDMNLSRNKFDGSIPRLS-------- 674

  Fly   455 TQEKETPFVRQNTPH-------PKDLKAKAQKLKVERSRNE---------EHANLVTLPEENGTK 503
               |.|...:.:..|       |..|.:.....|::.|.|.         |....:|..:.:..|
plant   675 ---KLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNK 736

  Fly   504 ----LAETPTETRTIA-----------NNHQQQPHPVQQ----------------PIVGVNSKQP 537
                |.:|||..:..|           |..:|:..|.::                ||:||    .
plant   737 LEGPLPDTPTFRKATADALEENIGLCSNIPKQRLKPCRELKKPKKNGNLVVWILVPILGV----L 797

  Fly   538 VVVGVVTPT-TTTVAPTGVQGGSEGASSTANNVKAATAAVVAELAATVGGSDEVQDDDEQEDEFE 601
            |::.:...| |..:....:|.|......|..|:.          ..:|.|..:.||..|..:||:
plant   798 VILSICANTFTYCIRKRKLQNGRNTDPETGENMS----------IFSVDGKFKYQDIIESTNEFD 852

  Fly   602 SDRRVGFQVEGEDDDFYKRPPKLHRRDTPHHLKNKRVQHLTDKQASEILANALASQERNDTTPQH 666
            ....:|       ...|.:..:.:.:||                       .:|.:..:||    
plant   853 PTHLIG-------TGGYSKVYRANLQDT-----------------------IIAVKRLHDT---- 883

  Fly   667 SLSGKVTSPIEEEEQL-------EVEQEQQQQ------QQQHPF-------DSSLSPISAG-KTA 710
             :..:::.|:.::|.|       |:......:      .::|.|       ..||:.:.|. :.|
plant   884 -IDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEA 947

  Fly   711 EASTDPDNLDGVTELRLEQYEIHIERTAAGLGLSIAGGKGSTPFKGDDDGIFISRVTEAGPADLA 775
            :..|....::.|..:......:|.:|....:...|:.|.    ...|:|  :.:::::.|.|   
plant   948 KRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGN----ILLDND--YTAKISDFGTA--- 1003

  Fly   776 GLKVGDKVIKVNGIVVVDADHYQAV---------------QVLKACG----AVLVLVVQREVTRL 821
                  |::|      .|:.::.||               :|.:.|.    .||:|.:      :
plant  1004 ------KLLK------TDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILEL------I 1050

  Fly   822 IG-HPVFSEDGSVSQISVETRPLVADAPPAASISHERYI 859
            || ||     |.:.. |:.:.|  .:|....|||.||.:
plant  1051 IGKHP-----GDLVS-SLSSSP--GEALSLRSISDERVL 1081

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 85/289 (29%)
leucine-rich repeat 18..38 CDD:275380 3/9 (33%)
LRR_8 37..95 CDD:290566 17/63 (27%)
leucine-rich repeat 39..61 CDD:275380 5/22 (23%)
leucine-rich repeat 62..84 CDD:275380 8/22 (36%)
LRR_8 84..138 CDD:290566 20/79 (25%)
leucine-rich repeat 85..107 CDD:275380 8/46 (17%)
leucine-rich repeat 108..130 CDD:275380 5/22 (23%)
LRR_8 129..187 CDD:290566 21/59 (36%)
leucine-rich repeat 131..153 CDD:275380 8/22 (36%)
leucine-rich repeat 154..176 CDD:275380 7/22 (32%)
leucine-rich repeat 177..199 CDD:275380 8/22 (36%)
LRR_8 198..256 CDD:290566 21/60 (35%)
leucine-rich repeat 200..222 CDD:275380 7/22 (32%)
leucine-rich repeat 223..245 CDD:275380 8/22 (36%)
LRR_8 267..325 CDD:290566 18/59 (31%)
leucine-rich repeat 269..289 CDD:275380 5/20 (25%)
leucine-rich repeat 292..314 CDD:275380 7/22 (32%)
leucine-rich repeat 315..337 CDD:275380 8/22 (36%)
LRR_4 337..375 CDD:289563 14/87 (16%)
leucine-rich repeat 361..382 CDD:275380 10/22 (45%)
PDZ 728..816 CDD:214570 18/106 (17%)
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AT1G35710NP_174809.1 leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
leucine-rich repeat 320..341 CDD:275380 6/20 (30%)
leucine-rich repeat 344..367 CDD:275380 8/22 (36%)
leucine-rich repeat 368..415 CDD:275380 15/46 (33%)
leucine-rich repeat 416..439 CDD:275380 8/22 (36%)
leucine-rich repeat 440..460 CDD:275380 5/19 (26%)
leucine-rich repeat 464..483 CDD:275380 7/18 (39%)
leucine-rich repeat 488..535 CDD:275380 8/46 (17%)
leucine-rich repeat 540..559 CDD:275380 0/18 (0%)
leucine-rich repeat 560..583 CDD:275380 7/22 (32%)
leucine-rich repeat 584..607 CDD:275380 10/22 (45%)
leucine-rich repeat 608..631 CDD:275380 7/22 (32%)
leucine-rich repeat 632..655 CDD:275380 2/24 (8%)
leucine-rich repeat 679..702 CDD:275380 3/22 (14%)
leucine-rich repeat 703..726 CDD:275380 4/22 (18%)
PLN00113 33..1118 CDD:215061 219/1014 (22%)
leucine-rich repeat 79..103 CDD:275380
leucine-rich repeat 104..127 CDD:275380
leucine-rich repeat 128..151 CDD:275380
leucine-rich repeat 152..175 CDD:275380 3/9 (33%)
leucine-rich repeat 176..199 CDD:275380 5/22 (23%)
leucine-rich repeat 200..223 CDD:275380 8/22 (36%)
leucine-rich repeat 224..247 CDD:275380 5/22 (23%)
leucine-rich repeat 248..271 CDD:275380 3/22 (14%)
leucine-rich repeat 272..295 CDD:275380 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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