DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AT3G15410

DIOPT Version :10

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_001189901.1 Gene:AT3G15410 / 820780 AraportID:AT3G15410 Length:590 Species:Arabidopsis thaliana


Alignment Length:503 Identity:151/503 - (30%)
Similarity:226/503 - (44%) Gaps:83/503 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EEILRYSRTLEELFLDANHIR------DLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVEL 88
            :.||:.:||...|.|....:.      |:|...::.  |...|..:|....:  |:|      :|
plant     2 DRILKAARTSGSLNLSNRSLNFDPITWDVPTEVYQC--LETTGEGENWWEAV--DLQ------KL 56

  Fly    89 DVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQ 153
            .::.|||..:.:|:|:|..|.|.:.|.|                       .|:.|||..|.||.
plant    57 ILAHNDIEVLREDLKNLACLVVLNVSHN-----------------------KLSQLPAAIGELTA 98

  Fly   154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELG 218
            ::||::..|.:..|||.|.....|.:||...|.:::||..:|....|.:|...:||:..||.::.
plant    99 MKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMV 163

  Fly   219 LLTKLTYLDVSENRLEEL-PNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRL 282
            ..:||:.|||..|:|..| .|.|:....|.:|:..:|:|..||..|..||||..|.|.||::..:
plant   164 NCSKLSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSV 228

  Fly   283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQC-ANLGVLSLRDN 346
            ..::|.|.::.|..|..|.||.|||.||.:::|..|::..|.|:..|  :|.| ..|..|.|.:|
plant   229 PPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNN 291

  Fly   347 KLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQSQPLLTFQPDTDAETGEQV 411
            .|..|.|||||.|.|..|.:.||.|..|..||||....|: |...:|:  |:...:|.|.|    
plant   292 SLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAAL-LKYLRSR--LSNSEETSAST---- 349

  Fly   412 LSCYLLPQQEYQPITPAR--------DLE----SD--SEPFEEREPSRTVVKFSEEATQEKETPF 462
                  |.:|....:.||        .||    ||  ||.:|..|  .|.|..|:.:.:|     
plant   350 ------PTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGE--ITKVNLSKNSIEE----- 401

  Fly   463 VRQNTPHPKDLKAKAQKLKVERSRNEE--HANLVTLPEENGTKLAETP 508
                .|.........|.|.:.|::.::  .|.|.:||.....||...|
plant   402 ----LPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNP 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 leucine-rich repeat 18..38 CDD:275380 2/7 (29%)
LRR_8 37..95 CDD:404697 13/63 (21%)
leucine-rich repeat 39..61 CDD:275380 4/27 (15%)
leucine-rich repeat 62..84 CDD:275380 5/21 (24%)
LRR 67..408 CDD:443914 113/342 (33%)
leucine-rich repeat 85..107 CDD:275380 7/21 (33%)
leucine-rich repeat 108..130 CDD:275380 4/21 (19%)
leucine-rich repeat 131..153 CDD:275380 6/21 (29%)
leucine-rich repeat 154..176 CDD:275380 7/21 (33%)
leucine-rich repeat 177..199 CDD:275380 7/21 (33%)
leucine-rich repeat 200..222 CDD:275380 6/21 (29%)
leucine-rich repeat 223..245 CDD:275380 9/22 (41%)
leucine-rich repeat 269..289 CDD:275380 6/19 (32%)
leucine-rich repeat 292..314 CDD:275380 10/21 (48%)
leucine-rich repeat 315..337 CDD:275380 7/22 (32%)
leucine-rich repeat 361..382 CDD:275380 10/20 (50%)
PDZ1_Scribble-like 730..816 CDD:467188
PDZ2_Scribble-like 927..1019 CDD:467187
PDZ3_Scribble-like 1238..1327 CDD:467186
PDZ4_Scribble-like 1331..1428 CDD:467185
AT3G15410NP_001189901.1 LRR 4..420 CDD:443914 143/474 (30%)
leucine-rich repeat 53..75 CDD:275380 8/27 (30%)
leucine-rich repeat 76..98 CDD:275380 10/44 (23%)
leucine-rich repeat 99..121 CDD:275380 7/21 (33%)
leucine-rich repeat 122..137 CDD:275380 5/14 (36%)
leucine-rich repeat 145..167 CDD:275380 6/21 (29%)
leucine-rich repeat 168..214 CDD:275380 17/45 (38%)
leucine-rich repeat 215..237 CDD:275380 7/21 (33%)
leucine-rich repeat 238..260 CDD:275380 10/21 (48%)
leucine-rich repeat 261..282 CDD:275380 7/22 (32%)
leucine-rich repeat 306..359 CDD:275380 19/65 (29%)
PRK15370 <348..>589 CDD:185268 28/119 (24%)
leucine-rich repeat 367..388 CDD:275380 7/20 (35%)
leucine-rich repeat 389..411 CDD:275380 5/30 (17%)
leucine-rich repeat 412..435 CDD:275380 6/22 (27%)
leucine-rich repeat 436..459 CDD:275380 3/10 (30%)
leucine-rich repeat 460..483 CDD:275380
leucine-rich repeat 484..506 CDD:275380
leucine-rich repeat 507..529 CDD:275380
leucine-rich repeat 530..553 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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