DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scrib and erbin

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_005155633.1 Gene:erbin / 566811 ZFINID:ZDB-GENE-061103-403 Length:1392 Species:Danio rerio


Alignment Length:1595 Identity:427/1595 - (26%)
Similarity:665/1595 - (41%) Gaps:392/1595 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KCIPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGL 67
            :|:   :|....|..:|..||||.|||:||..:.:|||||:||||.|.:|||..|....|.:|.|
Zfish    15 RCL---RGEEETVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSL 76

  Fly    68 SDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLT 132
            .||::..|||.|.|..||.|||||:|.|.:.|::||:.:.|.:.:.|.|||.|||.||:||.:|:
Zfish    77 PDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLS 141

  Fly   133 VLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYL 197
            .|.|||..|..|||.||.||:|:.||||||.||.||:::.:||:|:|||||.||..::|..|..|
Zfish   142 QLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQL 206

  Fly   198 PGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDG 262
            .|:.|||:|.|:|..:|..:|.|.:|:|||||:|.:|.:..:|||..:|.||.|:.|.|..||..
Zfish   207 TGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGS 271

  Fly   263 IAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEY 327
            |..|.:|:.||:|.|:|..|.||:|...::.||..:.|.:..||:||||...|.....|.|.|..
Zfish   272 IGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQ 336

  Fly   328 LPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391
            :|.|:|...|:.||.|..|||:.||.|:|:...|.|:::|.|:|..||||...| |:.|:|||||
Zfish   337 MPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSEN 401

  Fly   392 QSQPLLTFQPDTDAETGEQVLSCYLLPQQ----EYQPITPARDLESDSEPF-----EEREPSRTV 447
            ||:||:..|.:.|.||.:.||:.|:.|||    ||.|       .||||.|     ||:...|..
Zfish   402 QSKPLIPLQKEEDPETHKIVLTNYMFPQQTRTEEYVP-------NSDSESFNPSLWEEQRKQRAQ 459

  Fly   448 VKFS-EEATQEKETP---------------FVRQNTPHPKDLKAKAQKLKVERSRNEEHANLVTL 496
            |.|. :|...|:|.|               ..|..||:|.:||...:..:....|.:|       
Zfish   460 VAFECDEDKDEREMPPRVSSHRPLLSREGNLKRYPTPYPDELKNMVKTAQSVAHRLKE------- 517

  Fly   497 PEENGTKLAETPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTVAPTGVQGGS-- 559
             :|:|.:..:.|   |....||           :||   |.|.|.|:....|...|..:...:  
Zfish   518 -DESGDEAGKEP---RVSERNH-----------IGV---QDVGVKVIESPCTNGKPAEMDPKAAM 564

  Fly   560 ------EGASSTANNVKAATAAVVAELAATVGGSDEVQDDDEQEDEFESDRRVGFQVEGEDDDFY 618
                  |...|..|:.........::...|:...|:..:|.|:....|.:.::.          .
Zfish   565 NSNHNYEPIDSVDNHSIERIPLKTSDNMRTMVNHDDTLEDSEELSSEEEEMKIA----------E 619

  Fly   619 KRPPKLH-RRDTPHHLKNKRVQHLTDKQASEILANALASQERNDT--------------TPQHSL 668
            .|||.:. ..:.|..:...:.:....|.|..:|...:|:..:|::              |...|.
Zfish   620 MRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCSSPSRMSDSVSLTTDSSQ 684

  Fly   669 SGKVTSPIEEEEQL-------EVEQEQQQQQQQHPF-------DSSLSPISAGKTA-EASTDPDN 718
            ...:.:| |.|.::       :.::...|.:|..|.       ::||..|...:.: |:.:|   
Zfish   685 DNSLCTP-ERESKMPLIPKNGQEDENLNQLKQMTPLLQNCNGSETSLQTILKNQQSYESKSD--- 745

  Fly   719 LDGVTELRLEQYEIHIERTAAGLGLSIAGGKGSTPFKGDDDGIFISRVTEAGPADLAGLKVGDKV 783
                   ::..|...:|...|.:.            ||.::|:                      
Zfish   746 -------QMADYSFSMEERLALIE------------KGINNGV---------------------- 769

  Fly   784 IKVNGIVVVDADHYQAVQVLKACGAVLVLVVQREVTRLIGHPVFSEDGSVSQISVETRPLVADAP 848
                      .|.|....           .:...|.:|      |.|..::...:|.    ..:|
Zfish   770 ----------TDQYSKWD-----------QINMNVAKL------SPDNMLAYEELER----TKSP 803

  Fly   849 PA-ASISHERYIPAPIEIVPQQQHLQQQQQQPIQQVAPTHSYSGNVFATPT--------AAQTVQ 904
            || .::|........:|.:.....||:.|             ||..|.:.|        :.:||.
Zfish   804 PAKETMSSNNNARLSLENLENGNQLQKTQ-------------SGENFNSRTDQVPLRYESVRTVS 855

  Fly   905 PAVSAAPNGLLLNGRE----------APLSYIQLHTTLIRDQIGQGLG-FSIAGGKGSPPFKDDC 958
            ..|:|..:..|....|          ||:    :.:..|.:..|.|:. :||.|  .|||::..|
Zfish   856 TGVNALSDMSLSRSTEELSPEKKCPPAPV----VKSQSIANMDGGGMKLYSIEG--ESPPYEVAC 914

  Fly   959 DGIFISRITEGGLAYRDGKIMVGDRVMAINGNDMTEAHHDAAVACLTEPQRFVRLVLQREYRGPL 1023
                .||.:..|   ..|:.:|..:..::    :.:.|..                        :
Zfish   915 ----ASRTSVAG---AQGQSIVRSKSASL----LNDQHMQ------------------------I 944

  Fly  1024 EPPTSPRSPAVLNSLSP----SGYLANRPANFSRSVVEVEQPYKYNTLATTTPTP--KPTVP--- 1079
            .|.:|..|..:|:|..|    :.|.|..|..::........| |.|..:..||.|  :|.:|   
Zfish   945 YPGSSASSSDLLSSSKPPVSSTRYPAGPPPQYNIQYASSTVP-KDNLWSQRTPVPPDQPYMPPQH 1008

  Fly  1080 ----ASISNNNNT-----------------------LPSSKTNGFATAAAATIDSSTGQP--VPA 1115
                .:.||.||.                       ||.....|......:   .|:|.|  :|.
Zfish  1009 SLANTNFSNRNNAPPYPQPQQRGPPKTPDMWAKERMLPQVGQRGTLQRQGS---GSSGNPMCMPD 1070

  Fly  1116 PRRTNSVPMGDGDI-------GAGSTTSGDSGEAQPSSL--RPLTSDDFQAMIPAHFLSGGSQHQ 1171
            |||   :|..:||.       .||      .|..|.|..  |||::..:.       :.|.:..:
Zfish  1071 PRR---MPGMEGDYMTYRDIHAAG------RGPLQMSQALHRPLSARTYS-------MDGPNAPR 1119

  Fly  1172 VHVARPNEVGVSAVTVNVNKPQPDLPMFPAAPTEL-------------------GRVTETITKST 1217
            ...|||....|...|::|:    |......:|::.                   |||     .:.
Zfish  1120 PQSARPPPHEVPERTMSVS----DFIYQQGSPSKRSNMRVKSEHSLLDGPVGGGGRV-----PAD 1175

  Fly  1218 FTETVMTRITDNQLAEPLISEEV-VLPKNQGSLGFSIIGGTDHSCVPFGTREPG--IFISH---- 1275
            :.:.||..|...::.:..:|..: .|..:|.||.||.:.|..     ||...|.  :|..|    
Zfish  1176 WRDQVMRHIEAKKMEKSTLSRSLATLNGSQSSLAFSAVDGWQ-----FGAHGPSDDVFSPHGQQG 1235

  Fly  1276 -------IVPGGIASKCGKLRMGDRILKVNEADVSKATHQDAVLELL-------KPGDEIKLTIQ 1326
                   .||......|..:|..   :...:..:::...::.:::.|       .||.:   .:.
Zfish  1236 YHIDTLRKVPLMNGQMCPPVRSP---MSCTQPPMARHPSREQLIDYLMLKVSQQPPGPQ---RVP 1294

  Fly  1327 HDPLPPGFQEVLLSKAEGERLGMHIKGGLNGQRGNPADPSDEGVFVSKINSVGAARRDGRLKVGM 1391
            |:.|.   |||.:...:...||..|.||:.| ||||..|.|.|:||:::.|.|.|.:  .|:.|.
Zfish  1295 HETLQ---QEVHVKIEKNPELGFSISGGIGG-RGNPFRPDDNGIFVTRVQSEGPASK--LLQPGD 1353

  Fly  1392 RLLEVNGHSLLGASHQDAVNVLRNAGNEIQLVVCK 1426
            ::|:.||:|.:...|..||::|:...|.:.|::.:
Zfish  1354 KILQANGYSFVNIDHGHAVSLLKTFPNTVDLIIVR 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 133/269 (49%)
leucine-rich repeat 18..38 CDD:275380 10/19 (53%)
LRR_8 37..95 CDD:290566 32/57 (56%)
leucine-rich repeat 39..61 CDD:275380 13/21 (62%)
leucine-rich repeat 62..84 CDD:275380 10/21 (48%)
LRR_8 84..138 CDD:290566 27/53 (51%)
leucine-rich repeat 85..107 CDD:275380 11/21 (52%)
leucine-rich repeat 108..130 CDD:275380 12/21 (57%)
LRR_8 129..187 CDD:290566 33/57 (58%)
leucine-rich repeat 131..153 CDD:275380 12/21 (57%)
leucine-rich repeat 154..176 CDD:275380 12/21 (57%)
leucine-rich repeat 177..199 CDD:275380 11/21 (52%)
LRR_8 198..256 CDD:290566 26/57 (46%)
leucine-rich repeat 200..222 CDD:275380 9/21 (43%)
leucine-rich repeat 223..245 CDD:275380 11/21 (52%)
LRR_8 267..325 CDD:290566 22/57 (39%)
leucine-rich repeat 269..289 CDD:275380 10/19 (53%)
leucine-rich repeat 292..314 CDD:275380 9/21 (43%)
leucine-rich repeat 315..337 CDD:275380 7/21 (33%)
LRR_4 337..375 CDD:289563 16/37 (43%)
leucine-rich repeat 361..382 CDD:275380 10/21 (48%)
PDZ 728..816 CDD:214570 8/87 (9%)
PDZ_signaling 931..1016 CDD:238492 16/85 (19%)
PDZ 1239..1329 CDD:214570 20/110 (18%)
PDZ_signaling 1336..1425 CDD:238492 32/88 (36%)
erbinXP_005155633.1 LRR_RI 8..267 CDD:238064 125/254 (49%)
leucine-rich repeat 24..47 CDD:275380 11/22 (50%)
LRR_8 46..104 CDD:290566 32/57 (56%)
leucine-rich repeat 48..70 CDD:275380 13/21 (62%)
leucine-rich repeat 71..93 CDD:275380 10/21 (48%)
leucine-rich repeat 94..116 CDD:275380 11/21 (52%)
leucine-rich repeat 117..162 CDD:275380 24/44 (55%)
LRR_8 161..219 CDD:290566 31/57 (54%)
leucine-rich repeat 163..185 CDD:275380 12/21 (57%)
LRR_RI 186..401 CDD:238064 94/214 (44%)
leucine-rich repeat 186..208 CDD:275380 11/21 (52%)
leucine-rich repeat 209..231 CDD:275380 9/21 (43%)
LRR_8 230..288 CDD:290566 26/57 (46%)
leucine-rich repeat 232..254 CDD:275380 11/21 (52%)
leucine-rich repeat 255..275 CDD:275380 9/19 (47%)
leucine-rich repeat 278..300 CDD:275380 10/21 (48%)
leucine-rich repeat 301..323 CDD:275380 9/21 (43%)
leucine-rich repeat 324..346 CDD:275380 7/21 (33%)
LRR_8 345..402 CDD:290566 27/56 (48%)
leucine-rich repeat 347..369 CDD:275380 10/21 (48%)
DUF1421 961..>1152 CDD:284607 46/214 (21%)
PDZ_signaling <1331..1387 CDD:238492 19/57 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BA7S
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148064at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.