DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scrib and AgaP_AGAP006645

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_001688939.1 Gene:AgaP_AGAP006645 / 5667071 VectorBaseID:AGAP006645 Length:1110 Species:Anopheles gambiae


Alignment Length:874 Identity:187/874 - (21%)
Similarity:327/874 - (37%) Gaps:250/874 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 HLQSLQVADFSSN-PIPKLPSGFSQLKNLTVLGLNDMSLTTL---PADFGSLTQLESLELRENLL 164
            |:..|||.|.... ||...|..|.::....|:.:...:.|.:   |..|..|.:|.|:.|..:.:
Mosquito   366 HITDLQVLDVGPKYPIELGPEFFKKIGLSHVVSIKITNCTIVYISPQAFAGLDELYSVNLTNSGI 430

  Fly   165 KHL-PETISQLTKLKRLDLGDNEIEDL------PPYLGYL---PGLHELWLDHNQLQRLPPE-LG 218
            ..: |:|.:..|||:.|.|..|::..:      .||:.|:   |.:.||.:...:||.|.|. ..
Mosquito   431 DIIHPDTFANNTKLRLLTLSGNDLSAMQSVNHNTPYMDYMLKAPTVEELDISRCKLQELQPNAFN 495

  Fly   219 LLTKLTYLDVSENRLEELPNEI-SGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNR---- 278
            .|..:.|:::|||.|..||..| ..:.::.:|||:.|.:..||..|...:.|.||.|..|:    
Mosquito   496 ELKNIIYINLSENNLSNLPEGIFDNVETIEELDLSMNNIVELPKNIFAKTSLAILHLKHNKITNN 560

  Fly   279 -------LQRL-----------NDTLGNCENMQELILTENFLSEL-PASIGQMTKLNNLNVDRNA 324
                   ||:|           |......:.:..|||..|.:.:: |.:...:..|..:::..|.
Mosquito   561 VDFVTADLQKLDLSFCQIRTVHNTMFKGMDGLTNLILKGNHIEKIKPMAFISLKNLRQIDLSYNN 625

  Fly   325 LEYLPLE--IGQCANLGVLSLRDN-KLKKLPPE----------------LGNCTVLHVLDVSGNQ 370
            ||.:..:  ||. ..|.::.|.:| :||:||.|                :.||.:..:.|   |.
Mosquito   626 LEQISAQTFIGN-KMLDIIRLNNNPRLKRLPNEGFEISFNGTFTVYFMDVSNCDISELAD---NT 686

  Fly   371 LLYLPYSLVNLQLKAVW---------------------LSENQ--SQPLLTFQPDTDAET----G 408
            ...:|: |..|.|  .|                     ||.|.  :....|||.:.:..|    |
Mosquito   687 FKTMPH-LTRLNL--AWNNLQTIRSTYFAHLNKLMDLDLSNNMIINMDEKTFQNNRNLNTLNLAG 748

  Fly   409 EQVLSCYLLPQQEYQPITPARDLE-SDSEPFEEREPSRTVVKFSEEATQEKET--PFVRQNTPHP 470
            .|:.:   |..:.:.|:....:|: ||.:       .||:.:.|...|:.:|.  ...|.|..:.
Mosquito   749 NQIAT---LTSKLFHPLQYLSELDVSDCD-------LRTIWEDSAAGTKREEVLPNLKRLNVSYN 803

  Fly   471 K-------DLKAKAQKLKVERSRNEEHANLVTLPEENGTKL--AETPTETRTIANNHQQQPHPVQ 526
            :       ||::.. ||:|...||    |.:|..|...|.:  .:....:..:.:.|....|   
Mosquito   804 EIMEVFVSDLESMG-KLRVLDIRN----NTLTCNERLPTLIDWLQKKQISMGLGDTHDHVTH--- 860

  Fly   527 QPIVGVNSKQPVVVGVVTPTTTTVAPTGVQGGS------EGASSTANNVKAATAAVVAELAATVG 585
                         ..:.|...|..:.|..|.|.      :|..|.:.|.:           .|..
Mosquito   861 -------------AEMTTELRTDNSATLKQWGQFAWEICQGGGSDSPNQR-----------LTYS 901

  Fly   586 GSDE---VQDDDEQEDEFESDRRVGFQVEGEDDDFYKRPPKLHRRDTPHHLKNKRVQHLTDKQAS 647
            .|||   ::|:|:..|..::|      |..|                   .||.:...:.|.: :
Mosquito   902 ESDEEYNIEDEDDVSDAADAD------VMAE-------------------AKNAKSNKIVDSK-N 940

  Fly   648 EILANALASQERNDTTPQHSLSGKVTSPIEEEEQLEVEQEQQQQQQQHPFDSSLSPISAGKTAEA 712
            |:...:..|.:.:|:..:.| :.:.....:||:..:.:.::::|::::..|::            
Mosquito   941 ELDEYSDDSVDSDDSEDEDS-ADEDDEEDDEEDDDDDDDDEEEQERENILDAA------------ 992

  Fly   713 STDPDNLDGVTELRLEQYEIHIERTAAGLGLSIAGGKGSTPFKGDDDGIFISRVTEAGPADLAGL 777
                   :|:.  ::||              .|..||.:..   ||||.:          :..|.
Mosquito   993 -------NGIQ--KIEQ--------------GILTGKQADE---DDDGEY----------EDDGA 1021

  Fly   778 KVGDKVIKVNGIVVVDADHYQAVQVLKAC---G-AVLVLVVQREVTRLIGHPVFSEDGS------ 832
            .|.|.||..||.:..    ..:|.::.||   | ::|:|||.:.:|.     |....|.      
Mosquito  1022 SVDDVVILENGSMFA----VSSVWIVVACILFGISMLLLVVVKVLTE-----VMKRRGERYRQAL 1077

  Fly   833 -VSQISVETRPLVADAPPAASISHERYIP 860
             .|:.|...:.|..|..|:......||.|
Mosquito  1078 LASKNSFVYQKLTEDIVPSKVPKIHRYEP 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 59/216 (27%)
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566 10/34 (29%)
leucine-rich repeat 85..107 CDD:275380 1/2 (50%)
leucine-rich repeat 108..130 CDD:275380 8/22 (36%)
LRR_8 129..187 CDD:290566 16/61 (26%)
leucine-rich repeat 131..153 CDD:275380 5/24 (21%)
leucine-rich repeat 154..176 CDD:275380 5/22 (23%)
leucine-rich repeat 177..199 CDD:275380 7/30 (23%)
LRR_8 198..256 CDD:290566 20/59 (34%)
leucine-rich repeat 200..222 CDD:275380 7/22 (32%)
leucine-rich repeat 223..245 CDD:275380 8/22 (36%)
LRR_8 267..325 CDD:290566 16/80 (20%)
leucine-rich repeat 269..289 CDD:275380 9/41 (22%)
leucine-rich repeat 292..314 CDD:275380 5/22 (23%)
leucine-rich repeat 315..337 CDD:275380 6/23 (26%)
LRR_4 337..375 CDD:289563 12/54 (22%)
leucine-rich repeat 361..382 CDD:275380 4/20 (20%)
PDZ 728..816 CDD:214570 24/91 (26%)
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP006645XP_001688939.1 LRR_8 394..454 CDD:290566 16/59 (27%)
leucine-rich repeat 396..419 CDD:275380 5/22 (23%)
leucine-rich repeat 420..443 CDD:275380 5/22 (23%)
leucine-rich repeat 444..474 CDD:275380 7/29 (24%)
LRR_8 474..534 CDD:290566 20/59 (34%)
leucine-rich repeat 476..499 CDD:275380 7/22 (32%)
leucine-rich repeat 500..523 CDD:275380 8/22 (36%)
LRR_RI 517..807 CDD:238064 66/306 (22%)
leucine-rich repeat 524..546 CDD:275380 7/21 (33%)
LRR_8 525..602 CDD:290566 20/76 (26%)
leucine-rich repeat 547..567 CDD:275380 5/19 (26%)
leucine-rich repeat 568..591 CDD:275380 4/22 (18%)
LRR_8 591..649 CDD:290566 13/58 (22%)
leucine-rich repeat 592..615 CDD:275380 5/22 (23%)
leucine-rich repeat 616..639 CDD:275380 6/23 (26%)
leucine-rich repeat 640..660 CDD:275380 8/19 (42%)
LRR_8 672..727 CDD:290566 12/60 (20%)
leucine-rich repeat 693..716 CDD:275380 4/24 (17%)
leucine-rich repeat 717..740 CDD:275380 6/22 (27%)
leucine-rich repeat 741..762 CDD:275380 4/23 (17%)
leucine-rich repeat 765..794 CDD:275380 8/35 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.