Sequence 1: | NP_001163746.1 | Gene: | scrib / 44448 | FlyBaseID: | FBgn0263289 | Length: | 2585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013463.1 | Gene: | lrrc1 / 541316 | ZFINID: | ZDB-GENE-050320-1 | Length: | 526 | Species: | Danio rerio |
Alignment Length: | 566 | Identity: | 279/566 - (49%) |
---|---|---|---|
Similarity: | 375/566 - (66%) | Gaps: | 56/566 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFKCIPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKL 65
Fly 66 GLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKN 130
Fly 131 LTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLG 195
Fly 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALP 260
Fly 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNAL 325
Fly 326 EYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390
Fly 391 NQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARD-----------LESD--SEPFEERE 442
Fly 443 PSR-TVVKFSEEATQE--KETPFVRQNTPHPKDLKAKAQKLKVERSRNEEHANLVTLPEENGTKL 504
Fly 505 AETPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTV 550 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scrib | NP_001163746.1 | LRR_RI | 13..283 | CDD:238064 | 160/269 (59%) |
leucine-rich repeat | 18..38 | CDD:275380 | 12/19 (63%) | ||
LRR_8 | 37..95 | CDD:290566 | 42/57 (74%) | ||
leucine-rich repeat | 39..61 | CDD:275380 | 16/21 (76%) | ||
leucine-rich repeat | 62..84 | CDD:275380 | 18/21 (86%) | ||
LRR_8 | 84..138 | CDD:290566 | 28/53 (53%) | ||
leucine-rich repeat | 85..107 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 108..130 | CDD:275380 | 13/21 (62%) | ||
LRR_8 | 129..187 | CDD:290566 | 33/57 (58%) | ||
leucine-rich repeat | 131..153 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 154..176 | CDD:275380 | 16/21 (76%) | ||
leucine-rich repeat | 177..199 | CDD:275380 | 10/21 (48%) | ||
LRR_8 | 198..256 | CDD:290566 | 32/57 (56%) | ||
leucine-rich repeat | 200..222 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 223..245 | CDD:275380 | 14/21 (67%) | ||
LRR_8 | 267..325 | CDD:290566 | 33/57 (58%) | ||
leucine-rich repeat | 269..289 | CDD:275380 | 11/19 (58%) | ||
leucine-rich repeat | 292..314 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 315..337 | CDD:275380 | 13/21 (62%) | ||
LRR_4 | 337..375 | CDD:289563 | 21/37 (57%) | ||
leucine-rich repeat | 361..382 | CDD:275380 | 14/20 (70%) | ||
PDZ | 728..816 | CDD:214570 | |||
PDZ_signaling | 931..1016 | CDD:238492 | |||
PDZ | 1239..1329 | CDD:214570 | |||
PDZ_signaling | 1336..1425 | CDD:238492 | |||
lrrc1 | NP_001013463.1 | LRR_RI | 23..243 | CDD:238064 | 129/219 (59%) |
LRR_8 | 37..94 | CDD:290566 | 42/56 (75%) | ||
leucine-rich repeat | 38..60 | CDD:275380 | 16/21 (76%) | ||
leucine-rich repeat | 61..83 | CDD:275380 | 18/21 (86%) | ||
leucine-rich repeat | 84..106 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 107..129 | CDD:275380 | 13/21 (62%) | ||
leucine-rich repeat | 130..152 | CDD:275380 | 10/21 (48%) | ||
LRR_8 | 152..209 | CDD:290566 | 33/56 (59%) | ||
leucine-rich repeat | 153..175 | CDD:275380 | 16/21 (76%) | ||
leucine-rich repeat | 176..198 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 199..221 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 222..244 | CDD:275380 | 14/21 (67%) | ||
leucine-rich repeat | 268..290 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 291..313 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 337..359 | CDD:275380 | 10/21 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D148064at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_102427 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |