DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AgaP_AGAP007461

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_001237077.2 Gene:AgaP_AGAP007461 / 4576239 VectorBaseID:AGAP007461 Length:384 Species:Anopheles gambiae


Alignment Length:354 Identity:98/354 - (27%)
Similarity:148/354 - (41%) Gaps:76/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLH----RLRKLGLSDNEI 72
            |..|..:...||||..:|       ||          ||::| |..||.    |:|.|.|:    
Mosquito    69 NVNVSLLHIEHCSLTGMP-------RT----------IRNVP-NLLRLAIKSCRIRHLDLN---- 111

  Fly    73 GRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLN 137
                 |..:..:|..:|::.|.|..|      .:.|..:|.      .||.....|.|.::..||
Mosquito   112 -----DFADLHSLYSVDLTNNRIVTI------TELLPASDL------VLPINRLYLANNSLTQLN 159

  Fly   138 DMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202
            ..:|       |:||.|..|.|..|.::.:...|: |.||:.|.|.:|.|:.|.....:||.|..
Mosquito   160 VRAL-------GALTDLHCLVLEGNRIEEVNSPIA-LPKLEELSLRNNRIKQLNCTGWHLPALKY 216

  Fly   203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEA--------- 258
            |:...|:|...|.|...:.::..||:|.|.|.....:...|..|..|:||.|.|.:         
Mosquito   217 LFCSGNRLSIAPIEWQSMWRIEVLDLSFNLLHSFRMDDIYLTQLYALNLAGNQLTSVTTPQMHFR 281

  Fly   259 LPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRN 323
            :|     ||||.   |.||||..|:.:..:..|:.||.:..|.|:||.....:...|..:.:.||
Mosquito   282 VP-----LSRLW---LAQNRLPVLDISRWDMPNLWELDVAHNRLTELADVFVRFPNLAPMMILRN 338

  Fly   324 ---ALEYL----PLEIGQCANLGVLSLRD 345
               :.|:|    |.::.: .|.|.||..:
Mosquito   339 NQWSCEWLARVHPTDLRR-KNYGCLSTNE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 79/282 (28%)
leucine-rich repeat 18..38 CDD:275380 5/19 (26%)
LRR_8 37..95 CDD:290566 16/61 (26%)
leucine-rich repeat 39..61 CDD:275380 6/25 (24%)
leucine-rich repeat 62..84 CDD:275380 4/21 (19%)
LRR_8 84..138 CDD:290566 12/53 (23%)
leucine-rich repeat 85..107 CDD:275380 5/21 (24%)
leucine-rich repeat 108..130 CDD:275380 5/21 (24%)
LRR_8 129..187 CDD:290566 18/57 (32%)
leucine-rich repeat 131..153 CDD:275380 5/21 (24%)
leucine-rich repeat 154..176 CDD:275380 6/21 (29%)
leucine-rich repeat 177..199 CDD:275380 7/21 (33%)
LRR_8 198..256 CDD:290566 18/57 (32%)
leucine-rich repeat 200..222 CDD:275380 6/21 (29%)
leucine-rich repeat 223..245 CDD:275380 6/21 (29%)
LRR_8 267..325 CDD:290566 19/60 (32%)
leucine-rich repeat 269..289 CDD:275380 7/19 (37%)
leucine-rich repeat 292..314 CDD:275380 6/21 (29%)
leucine-rich repeat 315..337 CDD:275380 6/28 (21%)
LRR_4 337..375 CDD:289563 4/9 (44%)
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP007461XP_001237077.2 LRR_8 71..129 CDD:290566 22/84 (26%)
leucine-rich repeat 72..94 CDD:275380 11/39 (28%)
LRR_RI 78..319 CDD:238064 84/295 (28%)
leucine-rich repeat 95..118 CDD:275380 7/31 (23%)
leucine-rich repeat 119..146 CDD:275380 9/38 (24%)
LRR_8 147..201 CDD:290566 19/61 (31%)
leucine-rich repeat 147..168 CDD:275380 7/27 (26%)
LRR_4 169..205 CDD:289563 12/36 (33%)
leucine-rich repeat 169..190 CDD:275380 6/21 (29%)
LRR_8 189..247 CDD:290566 19/57 (33%)
leucine-rich repeat 191..213 CDD:275380 7/21 (33%)
leucine-rich repeat 214..236 CDD:275380 6/21 (29%)
leucine-rich repeat 237..259 CDD:275380 6/21 (29%)
leucine-rich repeat 307..329 CDD:275380 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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