DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and CG5819

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_001246458.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:763 Identity:167/763 - (21%)
Similarity:280/763 - (36%) Gaps:196/763 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRL-PPDIQNFENLVELDVSRNDIPD----I 98
            :|.|.|..|...:.|..:..:..|..|.||.|.|..: ...:..|.:|..|.::.|.|..    .
  Fly    56 VEHLDLSGNKFLEFPTLYADIDSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNSIDSWESLS 120

  Fly    99 PDD-IKHLQSLQVADFSSNPIPKLPSG--FSQL--KNLTVLGLNDMSLTTLPAD--FGSLTQLES 156
            |:: .|:..||:......|.:....:|  |..|  .:||.|||:...::::..|  ...|..||.
  Fly   121 PNEAFKYAPSLKRLGLDGNRLGSFGNGESFELLTSSSLTDLGLSSCGISSIGGDQMVNQLPNLER 185

  Fly   157 LELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPP-YLGYLPGLHELWLDHN---QLQRLPPEL 217
            |.|..|.|..:....|:  .|:.|||.:..|::|.. :|..:..|..|.|..|   |...|..:.
  Fly   186 LNLANNQLAQIAALPSR--TLRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDP 248

  Fly   218 GLLTKLTYLDVSENRLEELPNEISGLVSLTD------------------------LDLAQNLLEA 258
            .|...|..||||...|:.:  |:|||..||:                        :||:||:|..
  Fly   249 ILTYMLRKLDVSYCNLDSI--ELSGLPQLTEVRLQGNLLRVVDVNTFANNSMLEVVDLSQNVLRH 311

  Fly   259 L-PDGIAKLSRLTILKLDQNRLQRLN-DTLGNCENMQELILTENFLSEL---------------- 305
            : .|..|||.||..|.|..|.:.||: :.:.|.:.:.||.|:.|.|.:|                
  Fly   312 IGQDAFAKLKRLKELNLAFNEIARLDRNFIRNNDVLVELNLSRNVLQKLTKIVSNSVRTINMSWC 376

  Fly   306 ------PASIGQMTKLNNLNVDRNALEYLP-------LEIGQCANLGVLSLRDNKLKKLPPELGN 357
                  ..::..::.:..|::..|.:..:|       |:....||..:.::|:|..::. |||.:
  Fly   377 EITSIESTALSSLSVIQKLDLSNNLITDMPTFMRSETLQQLNLANCRLTTVRNNTFREF-PELAD 440

  Fly   358 CTVLHVLDVSGNQLLY-LP--YSLVNLQLKAVWLSENQ-----SQPL-------LTFQP----DT 403
                  |.::||:|.. :|  |...|..|..:||.:|.     ..||       ||.:|    |.
  Fly   441 ------LHLNGNRLTSPIPPNYFDGNKFLDQLWLGDNPWICDCHSPLFVDFYDYLTAKPAKIKDR 499

  Fly   404 D-----------------------------AETGEQVLSCYLLP-------------QQEYQPIT 426
            :                             :.|||:..|..:|.             .|:|  :.
  Fly   500 NHLRCAAPAVFYGKLWEFACADVWILNARTSSTGEKAWSIIMLTLLGLGALVLGYACLQKY--LR 562

  Fly   427 PARDLESDSEPFEEREPSRTVVKFSEEATQEKETPFVRQNTPHPKDLKAKAQKLKVERSRNEEHA 491
            ..:..:||.|..|..:..|.:...:|...:|:.||.: |:|.....|.:....|::.:       
  Fly   563 KRKVRQSDREYEENDDELRRIRDLNERILREEATPSL-QHTQEISLLPSYEDALRMPK------- 619

  Fly   492 NLVTLPEENGTKLAETPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTVAPTGVQ 556
              :..|.::...|: .|...|......:.|.|     ..|..|:             :.|..|:|
  Fly   620 --LVRPVKSMMDLS-GPERARNSRKLRRSQTH-----ADGDGSQ-------------SEAEDGLQ 663

  Fly   557 GGS----EGASSTANNVKAATAAV-----VAELAATVGGSDEVQDDDE-------QEDEFESDRR 605
            ..|    ......:|..|..||..     ...:.....||.....:|.       :....:|..:
  Fly   664 LDSRQRFRSVEMLSNRDKERTAQYGPYRRTGYMEYNQSGSRRFSIEDSRFPAAHLKTQNLQSAEQ 728

  Fly   606 VGFQVEGEDDDFYKRPPKLHRRDTPH----HLKNKRVQHLTDKQASEI 649
            :|.....|:..:.||.||:  .:.|.    ::....|:.|||.:..|:
  Fly   729 IGNFQSYENSPYTKRKPKI--AEIPPFKRVNMMADSVEFLTDPEYDEV 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 79/284 (28%)
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566 15/56 (27%)
leucine-rich repeat 39..61 CDD:275380 5/21 (24%)
leucine-rich repeat 62..84 CDD:275380 7/22 (32%)
LRR_8 84..138 CDD:290566 17/62 (27%)
leucine-rich repeat 85..107 CDD:275380 6/26 (23%)
leucine-rich repeat 108..130 CDD:275380 5/25 (20%)
LRR_8 129..187 CDD:290566 18/59 (31%)
leucine-rich repeat 131..153 CDD:275380 7/23 (30%)
leucine-rich repeat 154..176 CDD:275380 7/21 (33%)
leucine-rich repeat 177..199 CDD:275380 7/22 (32%)
LRR_8 198..256 CDD:290566 23/84 (27%)
leucine-rich repeat 200..222 CDD:275380 7/24 (29%)
leucine-rich repeat 223..245 CDD:275380 10/21 (48%)
LRR_8 267..325 CDD:290566 16/80 (20%)
leucine-rich repeat 269..289 CDD:275380 6/20 (30%)
leucine-rich repeat 292..314 CDD:275380 6/43 (14%)
leucine-rich repeat 315..337 CDD:275380 4/28 (14%)
LRR_4 337..375 CDD:289563 10/38 (26%)
leucine-rich repeat 361..382 CDD:275380 7/23 (30%)
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
CG5819NP_001246458.1 leucine-rich repeat 56..78 CDD:275380 5/21 (24%)
LRR_RI <58..236 CDD:238064 47/179 (26%)
LRR_8 78..141 CDD:290566 16/62 (26%)
leucine-rich repeat 79..102 CDD:275380 7/22 (32%)
leucine-rich repeat 103..130 CDD:275380 6/26 (23%)
leucine-rich repeat 131..155 CDD:275380 5/23 (22%)
LRR_8 156..214 CDD:290566 18/59 (31%)
leucine-rich repeat 158..182 CDD:275380 7/23 (30%)
LRR_8 202..285 CDD:290566 26/86 (30%)
leucine-rich repeat 204..227 CDD:275380 7/22 (32%)
leucine-rich repeat 254..274 CDD:275380 10/21 (48%)
LRR_8 273..333 CDD:290566 16/59 (27%)
leucine-rich repeat 275..298 CDD:275380 2/22 (9%)
LRR_RI 277..>471 CDD:238064 44/200 (22%)
leucine-rich repeat 299..322 CDD:275380 9/22 (41%)
LRR_8 321..402 CDD:290566 16/80 (20%)
leucine-rich repeat 323..346 CDD:275380 7/22 (32%)
leucine-rich repeat 347..391 CDD:275380 6/43 (14%)
leucine-rich repeat 392..413 CDD:275380 3/20 (15%)
LRR_8 393..448 CDD:290566 14/61 (23%)
leucine-rich repeat 414..437 CDD:275380 5/23 (22%)
LRRCT 471..517 CDD:214507 7/45 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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