DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scrib and Toll-7

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_523797.1 Gene:Toll-7 / 37272 FlyBaseID:FBgn0034476 Length:1446 Species:Drosophila melanogaster


Alignment Length:1361 Identity:274/1361 - (20%)
Similarity:440/1361 - (32%) Gaps:452/1361 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VPEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLS--DNEIG------RLPPDIQNFE 83
            :|..:....:|||.|.||:..:..||.|.|. |..|:.|.||  ::|.|      ..|..:...:
  Fly   125 LPVAVFARLQTLEALRLDSCKLLQLPNNAFEGLATLKSLRLSTHNSEWGPTRTLELFPDSLGGLK 189

  Fly    84 NLVELDVSRNDIPDIPDD-IKHLQSLQVADFSSNPIPKLPS-GFSQL----------KNLTVLGL 136
            .|.:||:..|::..:|.. :..:.:|||.:.:.|.|..... ||:.:          ..|.||..
  Fly   190 QLTDLDLGDNNLRQLPSGFLCPVGNLQVLNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQVLDA 254

  Fly   137 NDMSLTTLPADFG--SLTQLESLELRENLLKHLP-ETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198
            :...|.::...:|  .|.:|:.|.|..|.|..|. |.::.|..|:.::|.:|.:|.||.  |...
  Fly   255 SHNELRSISESWGISRLRRLQHLNLAYNNLSELSGEALAGLASLRIVNLSNNHLETLPE--GLFA 317

  Fly   199 G---LHELWLDHNQLQRLPPELGL---LTKLTYLDVSENRLEELPNEI-----SGLVSLTDLDLA 252
            |   |.|:.|..|:|..||.  ||   |.:|..:|:|.|:|..  |.:     :||:.|..|:||
  Fly   318 GSKELREIHLQQNELYELPK--GLFHRLEQLLVVDLSGNQLTS--NHVDNTTFAGLIRLIVLNLA 378

  Fly   253 QNLLEAL-------------------------PDGIAKLSRLTILKLDQNRLQRLNDTL------ 286
            .|.|..:                         .:....|..|..|.|.:|||..|:|.|      
  Fly   379 HNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAFLPLYNLHTLNLAENRLHTLDDKLFNGLYV 443

  Fly   287 -------------------GNCENMQELILTENFLSELPASIGQMTKLNNLNVDRN--------- 323
                               .||.:::||.|:.|.|:|:|.::..:..|..|::..|         
  Fly   444 LSKLTLNNNLISVVEPAVFKNCSDLKELDLSSNQLNEVPRALQDLAMLRTLDLGENQIRTFDNQS 508

  Fly   324 --------ALEYLPLEIGQCA--------NLGVLSLRDNKLKKLPPELGN--------------- 357
                    .|..:..:||...        .|.||:|..|:::.:  |.|:               
  Fly   509 FKNLHQLTGLRLIDNQIGNITVGMFQDLPRLSVLNLAKNRIQSI--ERGSFDKNFELEAIRLDRN 571

  Fly   358 ---------CTVLHV--LDVSGNQLLYLPYSLVNLQLKAVWLSENQSQPLLTFQPDTDAETGEQV 411
                     .|::.:  |::|.|.|::..|:.:...||  ||             |......|.:
  Fly   572 FLADINGVFATLVSLLWLNLSENHLVWFDYAFIPSNLK--WL-------------DIHGNYIEAL 621

  Fly   412 LSCYLLPQQEYQPITPARDLESDSEPFEEREP---SRTVVKFSEEATQEKETPFVRQN---TPHP 470
            .:.|.| |:|.:    .:.|::......|..|   ..|:           |..|:..|   ...|
  Fly   622 GNYYKL-QEEIR----VKTLDASHNRITEIGPMSIPNTI-----------ELLFINNNLIGNVQP 670

  Fly   471 KDLKAKAQKLKVERSRNE---------EHANLVT---LPEENGTKLAETPTETRTI------ANN 517
            .....||...:|:...|:         ..|.:|.   |||   ..|...|.|....      .||
  Fly   671 NAFVDKANLARVDLYANQLSKLQLQQLRVAPVVAPKPLPE---FYLGGNPFECDCTMDWLQRINN 732

  Fly   518 HQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTVAPTGVQGGSEG---ASSTANNVKAATAAVVAE 579
            ...:.||....:..:....|...|......:.:.|.......|.   |.....:..|....:...
  Fly   733 LTTRQHPRVMDMANIECVMPHARGAAVRPLSGLRPQDFLCRYESHCFALCHCCDFDACDCEMTCP 797

  Fly   580 LAAT-----VGGSDEVQDDDEQEDEFESDRRVGFQ-----VEGEDDDFYKRPPKLHRRDTPHHLK 634
            ...|     :..::.|....:|..|.  .|||...     ::|.:....|....:.|       |
  Fly   798 SNCTCYHDQIWSTNVVDCGGQQTTEL--PRRVPMDSSVVYLDGNNFPVLKNHAFIGR-------K 853

  Fly   635 NKRVQHLTDKQASEILANALASQERNDTTPQHSLSGKV-TSPIEEEEQLEVEQEQQQQQQQHPF- 697
            |.|..::...|.:.|.....||.......  |....|: |....|.|||...:|...|..|... 
  Fly   854 NLRALYVNGSQVAAIQNRTFASLASLQLL--HLADNKLRTLHGYEFEQLSALRELYLQNNQLTTI 916

  Fly   698 -DSSLSPISAGKTAEASTDPDNLDGVTELRLEQYEIHIERTAAGLGL-SIAGGKGSTPFKGDDDG 760
             :::|:|:       |:.:...:||...:.|..:::|  .|..|..| ||:.|:.....:..   
  Fly   917 ENATLAPL-------AALELIRIDGNRLVTLPIWQMH--ATHFGTRLKSISLGRNQWSCRCQ--- 969

  Fly   761 IFISRVTEAGPADLAGLKVGDKVIKVNGIVVVDADHYQAVQVLKACGAVLVLVVQREVTRLIGHP 825
             |:..:|.         .|.|     |.::|.||.....:......|:..:              
  Fly   970 -FLQALTS---------YVAD-----NALIVQDAQDIYCMAASSGTGSAAL-------------- 1005

  Fly   826 VFSEDGSVSQISVETRPLVADAPPAASISHERYIPAPIEIVPQQQHLQQQQQQPIQQVAPTHSYS 890
               ||.|.:..|:|.|.|..:|..||.                                 |..||
  Fly  1006 ---EDSSSNSGSLEKRELDFNATGAAC---------------------------------TDYYS 1034

  Fly   891 GNVFATPTAAQTVQPAVSAAPNGLLL-----------------------------NGREAPLSY- 925
            |.........::..|.::||...|.|                             ...|:...| 
  Fly  1035 GGSMLQHGIPESYIPLLAAALALLFLLVVIAMVFAFRESLRIWLFAHYGVRVFGPRCEESEKLYD 1099

  Fly   926 -IQLHTTLIRDQIGQGLGFSIAGGKGSPPFKDDCDGIFISRITEGGLAYRD-------GKIMVGD 982
             :.||:....:.:.|.|...:..|:  ||.: .|            |.:||       .:::...
  Fly  1100 AVLLHSAKDSEFVCQHLAAQLETGR--PPLR-VC------------LQHRDLAHDATHYQLLEAT 1149

  Fly   983 R-----VMAINGN---------DMTEAHHDAAVACLTEPQRFV-----RLVLQRE---------- 1018
            |     |:.:..|         ::..:.|||...   .||:.|     .:..:.|          
  Fly  1150 RVSRRVVILLTRNFLQTEWARCELRRSVHDALRG---RPQKLVIIEEPEVAFEAESDIELLPYLK 1211

  Fly  1019 -------------------YRGPLEPPT-------------------SPRSPAVL-NSLSPSGYL 1044
                               |..|::.||                   .|.||.:| ....|..|.
  Fly  1212 TSAVHRIRRSDRHFWEKLRYALPVDYPTFRGNNYTLELDHHNHERVKQPASPGLLYRQAPPPAYC 1276

  Fly  1045 ANR------------PANFSRSVVEVEQPYKYNTLATTTPTPKP----TVPASISNNNNTL 1089
            ...            |.|.|   |..||  .|:|..|.||:|:|    ..|.|.|..|:.|
  Fly  1277 GPADAVGIGAVPQVVPVNAS---VPAEQ--NYSTATTATPSPRPQRRGEQPGSGSGGNHHL 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 84/314 (27%)
leucine-rich repeat 18..38 CDD:275380 1/9 (11%)
LRR_8 37..95 CDD:290566 22/66 (33%)
leucine-rich repeat 39..61 CDD:275380 10/22 (45%)
leucine-rich repeat 62..84 CDD:275380 7/29 (24%)
LRR_8 84..138 CDD:290566 15/65 (23%)
leucine-rich repeat 85..107 CDD:275380 5/22 (23%)
leucine-rich repeat 108..130 CDD:275380 7/32 (22%)
LRR_8 129..187 CDD:290566 17/60 (28%)
leucine-rich repeat 131..153 CDD:275380 6/23 (26%)
leucine-rich repeat 154..176 CDD:275380 8/22 (36%)
leucine-rich repeat 177..199 CDD:275380 7/21 (33%)
LRR_8 198..256 CDD:290566 24/68 (35%)
leucine-rich repeat 200..222 CDD:275380 10/24 (42%)
leucine-rich repeat 223..245 CDD:275380 8/26 (31%)
LRR_8 267..325 CDD:290566 21/99 (21%)
leucine-rich repeat 269..289 CDD:275380 9/44 (20%)
leucine-rich repeat 292..314 CDD:275380 7/21 (33%)
leucine-rich repeat 315..337 CDD:275380 6/46 (13%)
LRR_4 337..375 CDD:289563 12/63 (19%)
leucine-rich repeat 361..382 CDD:275380 5/22 (23%)
PDZ 728..816 CDD:214570 16/88 (18%)
PDZ_signaling 931..1016 CDD:238492 18/110 (16%)
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
Toll-7NP_523797.1 LRR_8 135..201 CDD:290566 22/65 (34%)
leucine-rich repeat 136..159 CDD:275380 10/22 (45%)
leucine-rich repeat 160..190 CDD:275380 7/29 (24%)
LRR_8 189..259 CDD:290566 15/69 (22%)
leucine-rich repeat 191..214 CDD:275380 5/22 (23%)
leucine-rich repeat 215..248 CDD:275380 7/32 (22%)
LRR_RI 247..501 CDD:238064 68/259 (26%)
LRR_8 247..308 CDD:290566 17/60 (28%)
leucine-rich repeat 249..273 CDD:275380 6/23 (26%)
leucine-rich repeat 274..297 CDD:275380 8/22 (36%)
LRR_8 297..356 CDD:290566 22/62 (35%)
leucine-rich repeat 298..321 CDD:275380 8/24 (33%)
leucine-rich repeat 322..345 CDD:275380 10/24 (42%)
LRR_8 345..406 CDD:290566 14/62 (23%)
leucine-rich repeat 346..371 CDD:275380 8/26 (31%)
leucine-rich repeat 372..395 CDD:275380 6/22 (27%)
leucine-rich repeat 396..419 CDD:275380 1/22 (5%)
LRR_8 419..478 CDD:290566 15/58 (26%)
leucine-rich repeat 420..443 CDD:275380 9/22 (41%)
leucine-rich repeat 444..467 CDD:275380 2/22 (9%)
LRR_RI 466..622 CDD:238064 32/172 (19%)
leucine-rich repeat 468..488 CDD:275380 7/19 (37%)
LRR_8 491..549 CDD:290566 11/57 (19%)
leucine-rich repeat 491..514 CDD:275380 3/22 (14%)
leucine-rich repeat 515..536 CDD:275380 3/20 (15%)
leucine-rich repeat 539..562 CDD:275380 7/24 (29%)
leucine-rich repeat 563..585 CDD:275380 1/21 (5%)
leucine-rich repeat 586..626 CDD:275380 11/54 (20%)
leucine-rich repeat 627..653 CDD:275380 6/30 (20%)
LRRCT 716..772 CDD:214507 9/55 (16%)
LRRNT 796..830 CDD:214470 7/35 (20%)
leucine-rich repeat 812..829 CDD:275380 6/18 (33%)
leucine-rich repeat 833..854 CDD:275380 3/27 (11%)
LRR_8 853..913 CDD:290566 16/61 (26%)
leucine-rich repeat 855..878 CDD:275380 5/22 (23%)
LRR_4 878..918 CDD:289563 10/41 (24%)
leucine-rich repeat 879..902 CDD:275380 7/24 (29%)
leucine-rich repeat 903..926 CDD:275380 5/29 (17%)
leucine-rich repeat 927..953 CDD:275380 6/27 (22%)
TIR 1098..1235 CDD:214587 23/154 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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