DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AgaP_AGAP009630

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_553424.2 Gene:AgaP_AGAP009630 / 3292016 VectorBaseID:AGAP009630 Length:410 Species:Anopheles gambiae


Alignment Length:307 Identity:70/307 - (22%)
Similarity:108/307 - (35%) Gaps:89/307 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   545 PTTTTVAPTGVQGGS---EGASSTANNVKAATAAVVAELAATVGGSDEVQDDD-------EQEDE 599
            |..||  |..:.||.   |..|.||.....|......|....|....|..:.|       |::|:
Mosquito     7 PGRTT--PETMVGGIRKWEQLSRTAGKQSLAPFGDGYETPRQVKSRKEDSESDQEPTEPPEEDDQ 69

  Fly   600 F------ESDRRVGFQVEGEDDD--------------------FYKRPPKLHRRDTPHHLKNKRV 638
            :      ||:    |..|.|:||                    ..:.|||  |.:...||.:  :
Mosquito    70 YTEQHYSESE----FHTEQEEDDDEQADRNEHGWSEHAHPPIQVSQYPPK--RFEQGSHLLH--I 126

  Fly   639 QHLTDKQASEILANALASQER-------NDTTPQHSLSGKVTS-----PIEEEEQLEVEQEQQ-- 689
            ..:||:.....|.::..|:.|       :..|.:.|.||:..|     ....|...|:|:..|  
Mosquito   127 DFITDELGRFELPSSGQSRGRRPMGMVGSGATGRKSASGQQQSQQHNISFSRERVREIERTNQIL 191

  Fly   690 -----------QQQQQHPFDSSLSPISAGKTAEASTDPDNLDGVTELRLEQYEIHIERTAAGLGL 743
                       |.|      :|..|:.  :|:..:..|.........:::      |:.||...|
Mosquito   192 LRRIITTRPTLQTQ------TSSKPVK--RTSSTNASPATSAATNRRKMQ------EKIAAENEL 242

  Fly   744 SIAGGK----GSTPFKGDDDGIFISRVTEAGPADLAGLKVGDKVIKV 786
            .|..|:    |.|....::..|.|..|....||.||||:.||:|:.:
Mosquito   243 LIRKGEDGKIGITVRYIEEGKILICAVLRRSPAYLAGLRYGDEVLSL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566
leucine-rich repeat 131..153 CDD:275380
leucine-rich repeat 154..176 CDD:275380
leucine-rich repeat 177..199 CDD:275380
LRR_8 198..256 CDD:290566
leucine-rich repeat 200..222 CDD:275380
leucine-rich repeat 223..245 CDD:275380
LRR_8 267..325 CDD:290566
leucine-rich repeat 269..289 CDD:275380
leucine-rich repeat 292..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570 20/63 (32%)
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP009630XP_553424.2 KIAA1430 <173..246 CDD:290590 15/86 (17%)
PDZ 250..319 CDD:238080 14/40 (35%)
PDZ 335..399 CDD:238080
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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