DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AgaP_AGAP008172

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_555292.3 Gene:AgaP_AGAP008172 / 3291666 VectorBaseID:AGAP008172 Length:630 Species:Anopheles gambiae


Alignment Length:551 Identity:125/551 - (22%)
Similarity:209/551 - (37%) Gaps:158/551 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKGCN--RQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDN 70
            |.|..  |.::..:.|..||    |..||.| :|.:|.|..|...:|....:.|..|..|.:::|
Mosquito    48 FNGMKLLRTLDLSNNRLHSL----EGQLRLS-SLTDLKLSHNRFTELSCCGWNLSSLTNLNINNN 107

  Fly    71 EIGRLPP------DIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPK-------LP 122
            .:.|||.      .|.::.|||...:|.:|  ::.|.:..|:.|.:.|.|.|.:..       |.
Mosquito   108 TLQRLPTCMEDALPIVSYLNLVSNVLSNDD--NVWDRLASLRQLTLLDLSYNRLTSMVWDNVTLS 170

  Fly   123 SGFSQLKN---------LTVLGLN-DMSLTT---------------------------------- 143
            :.:..|:|         :.:.|.| ||..||                                  
Mosquito   171 TRYIDLRNNPMKYLNIPMAIDGFNVDMGCTTIDQLEVSSRSFNDTLSEIYCIPIRCSWHACGMVV 235

  Fly   144 ---LPADFGSLT------QLESLELRENL--------LKHLPETISQLTKLKRLDLGDNE----- 186
               |..:..|.|      .:|.|.:..|:        |::|..|......|.|:.|.::|     
Mosquito   236 AVMLECEHISCTISNWAPGVEGLSVLSNIPNNVKYIRLRYLNITTLYSDLLDRVKLSNDETFQAT 300

  Fly   187 IEDLPPYLGYLPG----LHELWLDHN--QLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVS 245
            |:..|....||..    .:.|.:|.|  .::..|..|    ||..|.:.::||..:|:.|..||.
Mosquito   301 IQHSPIQHAYLSSRTNISNMLLMDTNLSDIEIEPHNL----KLEILSIMQSRLRRVPDSIKRLVV 361

  Fly   246 LTDLDLAQNLLEALPDGI-AKLSRLTILKLDQNRLQRLNDTLGN---CENMQELILTENFLSELP 306
            |...|:.|:|::.:...: .||..|.:|.|.||::..||.:..:   ..::|.:.|..|.|:.:.
Mosquito   362 LQAFDIVQSLVDYVDLSLFCKLQHLQVLNLMQNKISFLNYSRSSGVEFPSLQVIYLAHNLLTTIS 426

  Fly   307 AS-IGQMTKLNNLNVDRNALEYLP------------------LEIGQC----ANLGVLSLRDNKL 348
            .: ...|..||.|::..|:|..|.                  .|:..|    ::|.:|::.:|.|
Mosquito   427 MNDFNGMKLLNILDLSNNSLYSLEGQLRLSSLTELKLSHNRFTELSWCGWNLSSLTILNINNNTL 491

  Fly   349 KKLP---------------------------PELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386
            ::||                           ..|.|...|.|||:|.|:|..:.::.|.|..:.:
Mosquito   492 QRLPTCMEDALPIVSYLSLVSNVLSNDDKIWDRLTNFNQLIVLDLSNNRLTSMVWNNVTLSTRYI 556

  Fly   387 WLSENQ------SQPLLTFQPDTDAETGEQV 411
            .|..|.      :.|...|:.||.....||:
Mosquito   557 NLRNNPIKYLNITTPKDMFKVDTGCSKIEQL 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 83/355 (23%)
leucine-rich repeat 18..38 CDD:275380 7/19 (37%)
LRR_8 37..95 CDD:290566 17/63 (27%)
leucine-rich repeat 39..61 CDD:275380 6/21 (29%)
leucine-rich repeat 62..84 CDD:275380 7/27 (26%)
LRR_8 84..138 CDD:290566 16/70 (23%)
leucine-rich repeat 85..107 CDD:275380 6/21 (29%)
leucine-rich repeat 108..130 CDD:275380 6/28 (21%)
LRR_8 129..187 CDD:290566 20/123 (16%)
leucine-rich repeat 131..153 CDD:275380 9/65 (14%)
leucine-rich repeat 154..176 CDD:275380 6/29 (21%)
leucine-rich repeat 177..199 CDD:275380 8/26 (31%)
LRR_8 198..256 CDD:290566 17/63 (27%)
leucine-rich repeat 200..222 CDD:275380 5/23 (22%)
leucine-rich repeat 223..245 CDD:275380 7/21 (33%)
LRR_8 267..325 CDD:290566 16/61 (26%)
leucine-rich repeat 269..289 CDD:275380 7/22 (32%)
leucine-rich repeat 292..314 CDD:275380 5/22 (23%)
leucine-rich repeat 315..337 CDD:275380 8/43 (19%)
LRR_4 337..375 CDD:289563 15/64 (23%)
leucine-rich repeat 361..382 CDD:275380 8/20 (40%)
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP008172XP_555292.3 leucine-rich repeat 4..29 CDD:275380
LRR_8 28..86 CDD:290566 14/42 (33%)
leucine-rich repeat 30..53 CDD:275380 2/4 (50%)
LRR_4 54..90 CDD:289563 12/40 (30%)
leucine-rich repeat 54..75 CDD:275380 8/25 (32%)
leucine-rich repeat 76..122 CDD:275380 12/45 (27%)
leucine-rich repeat 123..148 CDD:275380 7/26 (27%)
leucine-rich repeat 149..170 CDD:275380 4/20 (20%)
leucine-rich repeat 339..361 CDD:275380 7/21 (33%)
leucine-rich repeat 386..411 CDD:275378 7/24 (29%)
LRR_RI <410..542 CDD:238064 27/131 (21%)
LRR_8 410..468 CDD:290566 11/57 (19%)
leucine-rich repeat 412..435 CDD:275380 5/22 (23%)
leucine-rich repeat 436..457 CDD:275380 6/20 (30%)
LRR_8 456..515 CDD:290566 8/58 (14%)
leucine-rich repeat 458..480 CDD:275380 2/21 (10%)
leucine-rich repeat 481..504 CDD:275380 6/22 (27%)
leucine-rich repeat 505..530 CDD:275380 2/24 (8%)
leucine-rich repeat 531..553 CDD:275380 9/21 (43%)
leucine-rich repeat 554..574 CDD:275380 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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