DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AgaP_AGAP005667

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_556316.2 Gene:AgaP_AGAP005667 / 3290019 VectorBaseID:AGAP005667 Length:414 Species:Anopheles gambiae


Alignment Length:363 Identity:84/363 - (23%)
Similarity:136/363 - (37%) Gaps:107/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRL------HRLRKLGLSDN 70
            |..:|.:|  |..|..||.       |::|:.:         .|.|.|      ..::.:.::..
Mosquito    51 NTVMEHID--HAILEGVPS-------TIQEVIV---------TNSFALRWISVPRAVKSMMITST 97

  Fly    71 EIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLG 135
            .:.|:  ||:...:|..|.||..|:..:||.|||.::|               |:..:.:..:.|
Mosquito    98 NLRRM--DIETNSSLSYLAVSVCDLVKVPDSIKHARAL---------------GWLYITSCKLQG 145

  Fly   136 LNDMSL--------------------TTLPADFGSLTQLESLELRENLLKHLP-ETISQLTKLKR 179
            ||..||                    .|.....|....|.|:.|.||||..:. |..:.|.::..
Mosquito   146 LNMASLCDNVRLGVLSLMRNKIRYVVNTSTRHCGVYDALASVTLSENLLTTVSMELFNVLVRMDG 210

  Fly   180 LDLGDNEIEDLPPYL---------------------GY-LPGLHELWLDHNQLQRLPPELGLLTK 222
            |.|.:|.|..|...|                     |: :|.|..|.||.|.|..:|..:...|.
Mosquito   211 LYLQNNRIRTLAGQLIHGALAELRMDGNKLSSVDLCGWTVPSLASLMLDRNNLTAVPLCVNNFTN 275

  Fly   223 LTYLDVSENRLEELPNE-ISGLVSLTDLDLAQNLLEALPDGIAKL-SRLTILKLDQNRLQRLN-- 283
            .:.|.:..|||.....| ::|:.||..|||:.|.|:.:....|.. :.|.:|.:|.|.|:.|:  
Mosquito   276 TSLLTMRSNRLSNFTIESVAGMSSLRKLDLSCNTLKTVMLSTAHFPADLEMLNIDYNNLETLDLS 340

  Fly   284 -------------------DTLGNCENMQELILTENFL 302
                               |..|...|:.:|::.:|.:
Mosquito   341 FVPVRSLEVHVSYNLISSFDACGASRNVSQLLMYDNLI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 77/320 (24%)
leucine-rich repeat 18..38 CDD:275380 5/19 (26%)
LRR_8 37..95 CDD:290566 12/63 (19%)
leucine-rich repeat 39..61 CDD:275380 4/27 (15%)
leucine-rich repeat 62..84 CDD:275380 3/21 (14%)
LRR_8 84..138 CDD:290566 14/53 (26%)
leucine-rich repeat 85..107 CDD:275380 10/21 (48%)
leucine-rich repeat 108..130 CDD:275380 2/21 (10%)
LRR_8 129..187 CDD:290566 19/78 (24%)
leucine-rich repeat 131..153 CDD:275380 7/41 (17%)
leucine-rich repeat 154..176 CDD:275380 9/22 (41%)
leucine-rich repeat 177..199 CDD:275380 7/43 (16%)
LRR_8 198..256 CDD:290566 21/58 (36%)
leucine-rich repeat 200..222 CDD:275380 7/21 (33%)
leucine-rich repeat 223..245 CDD:275380 6/22 (27%)
LRR_8 267..325 CDD:290566 11/57 (19%)
leucine-rich repeat 269..289 CDD:275380 8/40 (20%)
leucine-rich repeat 292..314 CDD:275380 2/11 (18%)
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP005667XP_556316.2 LRR_RI <87..312 CDD:238064 60/241 (25%)
leucine-rich repeat 110..132 CDD:275380 10/21 (48%)
leucine-rich repeat 133..156 CDD:275380 7/37 (19%)
leucine-rich repeat 157..178 CDD:275380 1/20 (5%)
LRR_8 184..240 CDD:290566 15/55 (27%)
leucine-rich repeat 184..207 CDD:275380 9/22 (41%)
leucine-rich repeat 208..229 CDD:275380 6/20 (30%)
leucine-rich repeat 230..252 CDD:275380 1/21 (5%)
leucine-rich repeat 253..277 CDD:275380 8/23 (35%)
leucine-rich repeat 278..299 CDD:275380 6/20 (30%)
LRR_8 279..334 CDD:290566 18/54 (33%)
leucine-rich repeat 300..323 CDD:275380 7/22 (32%)
leucine-rich repeat 324..346 CDD:275380 6/21 (29%)
leucine-rich repeat 347..367 CDD:275380 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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