| Sequence 1: | NP_001163746.1 | Gene: | scrib / 44448 | FlyBaseID: | FBgn0263289 | Length: | 2585 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001380807.1 | Gene: | Cnot6 / 287249 | RGDID: | 1310783 | Length: | 557 | Species: | Rattus norvegicus |
| Alignment Length: | 522 | Identity: | 115/522 - (22%) |
|---|---|---|---|
| Similarity: | 188/522 - (36%) | Gaps: | 158/522 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 99 PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENL 163
Fly 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDV 228
Fly 229 SENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQ 293
Fly 294 ELILTEN-------FLSE----LPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNK 347
Fly 348 LKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQSQPLLTFQPDTDAETGEQVL 412
Fly 413 SCYLLPQQE------YQPITPARDLESDSEPFEERE----------------PSRTVVKFSEEAT 455
Fly 456 QEKETPFVRQNTPHPKD-----LKAKAQKLKVERSRNEEH------------ANLVTLPEENGTK 503
Fly 504 LAETPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVV----------GVVTPTTTTVAPTGVQGG 558
Fly 559 SE 560 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| scrib | NP_001163746.1 | LRR_RI | 13..283 | CDD:238064 | 52/183 (28%) |
| leucine-rich repeat | 18..38 | CDD:275380 | |||
| LRR_8 | 37..95 | CDD:290566 | |||
| leucine-rich repeat | 39..61 | CDD:275380 | |||
| leucine-rich repeat | 62..84 | CDD:275380 | |||
| LRR_8 | 84..138 | CDD:290566 | 6/38 (16%) | ||
| leucine-rich repeat | 85..107 | CDD:275380 | 2/7 (29%) | ||
| leucine-rich repeat | 108..130 | CDD:275380 | 2/21 (10%) | ||
| LRR_8 | 129..187 | CDD:290566 | 19/57 (33%) | ||
| leucine-rich repeat | 131..153 | CDD:275380 | 5/21 (24%) | ||
| leucine-rich repeat | 154..176 | CDD:275380 | 8/21 (38%) | ||
| leucine-rich repeat | 177..199 | CDD:275380 | 10/21 (48%) | ||
| LRR_8 | 198..256 | CDD:290566 | 18/57 (32%) | ||
| leucine-rich repeat | 200..222 | CDD:275380 | 13/21 (62%) | ||
| leucine-rich repeat | 223..245 | CDD:275380 | 4/21 (19%) | ||
| LRR_8 | 267..325 | CDD:290566 | 13/68 (19%) | ||
| leucine-rich repeat | 269..289 | CDD:275380 | 3/19 (16%) | ||
| leucine-rich repeat | 292..314 | CDD:275380 | 6/32 (19%) | ||
| leucine-rich repeat | 315..337 | CDD:275380 | 7/21 (33%) | ||
| LRR_4 | 337..375 | CDD:289563 | 4/37 (11%) | ||
| leucine-rich repeat | 361..382 | CDD:275380 | 0/20 (0%) | ||
| PDZ | 728..816 | CDD:214570 | |||
| PDZ_signaling | 931..1016 | CDD:238492 | |||
| PDZ | 1239..1329 | CDD:214570 | |||
| PDZ_signaling | 1336..1425 | CDD:238492 | |||
| Cnot6 | NP_001380807.1 | LRR | <52..>159 | CDD:227223 | 46/137 (34%) |
| LRR 1 | 52..73 | 7/20 (35%) | |||
| leucine-rich repeat | 53..75 | CDD:275378 | 8/21 (38%) | ||
| LRR 2 | 75..96 | 10/20 (50%) | |||
| leucine-rich repeat | 76..98 | CDD:275378 | 10/21 (48%) | ||
| LRR 3 | 98..120 | 12/21 (57%) | |||
| leucine-rich repeat | 99..121 | CDD:275378 | 13/21 (62%) | ||
| LRR 4 | 121..143 | 7/37 (19%) | |||
| leucine-rich repeat | 122..133 | CDD:275378 | 3/10 (30%) | ||
| Nuclease domain. /evidence=ECO:0000250 | 153..557 | 61/336 (18%) | |||
| Deadenylase_CCR4a | 191..540 | CDD:197340 | 53/298 (18%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||