DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and SLITRK5

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_001371538.1 Gene:SLITRK5 / 26050 HGNCID:20295 Length:958 Species:Homo sapiens


Alignment Length:802 Identity:175/802 - (21%)
Similarity:276/802 - (34%) Gaps:209/802 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PEEILRYSRTLEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLPPD-IQNFENLVELDVS 91
            |.|.:.|:.. ..|.|.:|.|:|:....|. |..||:|.|::|::..|..| ....|||..|.|.
Human    98 PNEFVNYTGA-SILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVD 161

  Fly    92 RNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLES 156
            .|.|..|.                      |:.|.:|..|.||.|||..|::||.:......|..
Human   162 YNYISVIE----------------------PNAFGKLHLLQVLILNDNLLSSLPNNLFRFVPLTH 204

  Fly   157 LELRENLLKHLPET--ISQLTKLKRLDLGDN------EIEDLPPYL-----GYLPG--------- 199
            |:||.|.||.||..  :..:.|:..|.|.:|      |:..|..:|     ..|.|         
Human   205 LDLRGNRLKLLPYVGLLQHMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFR 269

  Fly   200 LHELWLDHNQLQRLPP-------ELGLLTKLT---YLDVSENRLEELPNEISGL----------- 243
            ||...||....|.|.|       |:...|.|:   ||..:...:..:....|.:           
Human   270 LHGRDLDEVSKQELCPRRLISDYEMRPQTPLSTTGYLHTTPASVNSVATSSSAVYKPPLKPPKGT 334

  Fly   244 -------VSLTDLDLAQNL------------------LEALPDGIAKLSRLTILKLDQNRLQRLN 283
                   |..|....:::|                  ||. |...:...:::.|.|:.|..:|..
Human   335 RQPNKPRVRPTSRQPSKDLGYSNYGPSIAYQTKSPVPLEC-PTACSCNLQISDLGLNVNCQERKI 398

  Fly   284 DTLGNCE----NMQELILTENFLSEL-PASIGQMTKLNNLNVDRNALEYL-PLEIGQCANLGVLS 342
            :::...:    |.:::.||||:::.: .....:.|.|:.|::..|.:..: ....|...||..|.
Human   399 ESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLY 463

  Fly   343 LRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV------------NLQLKAVWLSENQSQP 395
            |..|::::|.|||       ...:...|.|:|.|:|:            ||||  ::|:.|..| 
Human   464 LNGNRIERLSPEL-------FYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQL--LFLNNNLLQ- 518

  Fly   396 LLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARDLESDSEPFEEREPSRTVVKFSEEATQEKET 460
                                .:|...:..:|..| |...|..|       |.:..|....|.|..
Human   519 --------------------AMPSGVFSGLTLLR-LNLRSNHF-------TSLPVSGVLDQLKSL 555

  Fly   461 PFVRQNTPHPKD-------LKAKAQKLKVERSRNEEHANLVTLPEENGTKLAETPTETRTIANN- 517
            ..:..: .:|.|       :|...::|||....:|.   :...|:    |.||  |:.|:|.:. 
Human   556 IQIDLH-DNPWDCTCDIVGMKLWVEQLKVGVLVDEV---ICKAPK----KFAE--TDMRSIKSEL 610

  Fly   518 ----------HQQQPHPVQQPIVGVNSKQPVVVGVVTPT---TTTVAPTGVQGGSEGASSTANNV 569
                      ....|..:|         .|.....|||.   .:|.||..: |...||||...:|
Human   611 LCPDYSDVVVSTPTPSSIQ---------VPARTSAVTPAVRLNSTGAPASL-GAGGGASSVPLSV 665

  Fly   570 KAATAAVVAELAATVGG--------------SDEVQDDDEQEDEFESDRRV---GFQVEGEDD-D 616
            ...:..:|..::..|..              ||....::.....|.....|   |....|... .
Human   666 LILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTSTNNSDVSSFNMQYSVYGGGGGTGGHPHAH 730

  Fly   617 FYKRPPKLHRRDTPHHLKNKRVQHLTDKQASEILANALASQERNDTTPQHSLSGKVTSPIEEEEQ 681
            .:.|.|.|.:..||.....:.:.|.........:..:.......|....|.|....:|....::|
Human   731 VHHRGPALPKVKTPAGHVYEYIPHPLGHMCKNPIYRSREGNSVEDYKDLHELKVTYSSNHHLQQQ 795

  Fly   682 LEVEQEQQQQQQQHPFDSSLSP 703
            .:.....||.|||.|....|.|
Human   796 QQPPPPPQQPQQQPPPQLQLQP 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 78/323 (24%)
leucine-rich repeat 18..38 CDD:275380 3/8 (38%)
LRR_8 37..95 CDD:290566 20/59 (34%)
leucine-rich repeat 39..61 CDD:275380 7/22 (32%)
leucine-rich repeat 62..84 CDD:275380 7/22 (32%)
LRR_8 84..138 CDD:290566 14/53 (26%)
leucine-rich repeat 85..107 CDD:275380 6/21 (29%)
leucine-rich repeat 108..130 CDD:275380 3/21 (14%)
LRR_8 129..187 CDD:290566 22/65 (34%)
leucine-rich repeat 131..153 CDD:275380 9/21 (43%)
leucine-rich repeat 154..176 CDD:275380 9/23 (39%)
leucine-rich repeat 177..199 CDD:275380 7/32 (22%)
LRR_8 198..256 CDD:290566 17/112 (15%)
leucine-rich repeat 200..222 CDD:275380 8/28 (29%)
leucine-rich repeat 223..245 CDD:275380 4/42 (10%)
LRR_8 267..325 CDD:290566 13/62 (21%)
leucine-rich repeat 269..289 CDD:275380 4/19 (21%)
leucine-rich repeat 292..314 CDD:275380 4/22 (18%)
leucine-rich repeat 315..337 CDD:275380 4/22 (18%)
LRR_4 337..375 CDD:289563 11/37 (30%)
leucine-rich repeat 361..382 CDD:275380 6/32 (19%)
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
SLITRK5NP_001371538.1 leucine-rich repeat 62..79 CDD:275380
LRR <72..319 CDD:227223 67/243 (28%)
LRR 1 82..103 2/4 (50%)
leucine-rich repeat 83..106 CDD:275380 3/7 (43%)
LRR 2 106..127 6/21 (29%)
leucine-rich repeat 107..130 CDD:275380 7/23 (30%)
LRR_8 129..189 CDD:404697 24/81 (30%)
LRR 3 130..151 7/20 (35%)
leucine-rich repeat 131..154 CDD:275380 7/22 (32%)
LRR 4 154..175 9/42 (21%)
leucine-rich repeat 155..178 CDD:275380 9/44 (20%)
LRR 5 178..199 9/20 (45%)
leucine-rich repeat 179..200 CDD:275380 9/20 (45%)
LRR 6 201..222 9/20 (45%)
leucine-rich repeat 202..226 CDD:275380 9/23 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..358 4/40 (10%)
PPP1R42 391..>563 CDD:411060 43/210 (20%)
LRR 7 410..431 5/20 (25%)
LRR_8 433..493 CDD:404697 18/66 (27%)
LRR 8 434..455 3/20 (15%)
leucine-rich repeat 435..458 CDD:275378 4/22 (18%)
LRR 9 458..479 9/27 (33%)
leucine-rich repeat 459..482 CDD:275378 8/29 (28%)
LRR 10 482..503 5/20 (25%)
leucine-rich repeat 483..530 CDD:275378 13/69 (19%)
LRR 11 506..527 8/43 (19%)
LRR 12 529..550 7/28 (25%)
leucine-rich repeat 531..554 CDD:275378 7/30 (23%)
leucine-rich repeat 555..567 CDD:275378 1/12 (8%)
TPKR_C2 563..>599 CDD:417692 9/42 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 789..844 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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