DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and cyr1

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_596159.1 Gene:cyr1 / 2540810 PomBaseID:SPBC19C7.03 Length:1692 Species:Schizosaccharomyces pombe


Alignment Length:1366 Identity:291/1366 - (21%)
Similarity:480/1366 - (35%) Gaps:392/1366 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFF-RLHRLRKLGLSDNEIGRLPPDIQN 81
            :|....:|..:|.:|..|:..|..|.:..|...|||.:|. |..:|::|.:|:|........|..
pombe   410 LDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITA 474

  Fly    82 FENLVELDVSRNDIPDIPDDI---KHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTT 143
            ...|..|::|||||.::...|   ....||:..:.::|.:..||.....|.|||.|.|:..:..|
pombe   475 LRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVT 539

  Fly   144 LPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIED-LPPYLGYLPGLHELWLDH 207
            .|.....|:|||:|....|||..:...|..|.|||.|.|..|::.: ||..:|.|..|..:.|.:
pombe   540 FPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSY 604

  Fly   208 NQLQRLPPELGLLTKLTYLDVSENRLE--ELPNEISGLVS-----LTDLDLA---QNL------- 255
            |.:..: ..|....||..::|:.|.|.  |..|..:..:.     ||.:|.|   .||       
pombe   605 NAITNI-ASLSECPKLNSINVACNLLSFYEYSNPSATFIDFSFCPLTTIDPAFSYSNLVYFDISH 668

  Fly   256 --LEALPDGIAK-LSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNN 317
              |..|.|.:.: |..:..:|::.|....::|.:...:|::.|..|...:|.:..::|::..|.:
pombe   669 AKLIGLKDSVIETLVNVETVKVNYNHFTSISDAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVH 733

  Fly   318 LNVDRNALEYLPLEIGQCANLGVLSLRDNKL----------KKLPPELGNCTVLHVLDVSGNQLL 372
            |::..|.::..|.|:.|.::|.|::|..|.|          |||...:....::..|  |||   
pombe   734 LDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLKIMRTL--SGN--- 793

  Fly   373 YLPYSLVNLQ------LKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARDL 431
              |.|.::.|      ::.::|.:|:.        ..|..|..:...|..:....|..:|..   
pombe   794 --PVSSLSSQEFVMPTVEELYLVDNRL--------GNDCFTALEYFKCLKVLNLSYNYLTEI--- 845

  Fly   432 ESDSEPFEEREPSRTVVKFSEEATQEKETPFVRQNTPHPKDLKAKAQKLKVERSRNEEHANLVTL 496
                       ||:....||     :.:..||..|......:.:.||.|            |.||
pombe   846 -----------PSKFFQNFS-----DLKHLFVSGNELANLSISSTAQVL------------LETL 882

  Fly   497 PEENGTKLAETPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTVAPTGVQGGSEG 561
             ..||.:|:..|        .::.....::...:..|:.|.:.|......:.|..|         
pombe   883 -YANGNRLSSFP--------KNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLP--------- 929

  Fly   562 ASSTANNVKAATAAVVAELAATVGGSDEVQDDDEQEDEFESDRRVGFQV-EGEDDDFYKRPPKLH 625
                                              |.:.........|:. |.||.:|        
pombe   930 ----------------------------------QLEYLNLSGNTWFRFSEHEDTNF-------- 952

  Fly   626 RRDTPHHLKNKRVQHLTD------KQASEILANALASQERNDTTP---QHSLSGKVTS--PIEEE 679
               |..:|||.:...:.|      ...|::|.:.:   :||...|   ::.:.|.::.  |:...
pombe   953 ---TKSYLKNLKFLSIMDLNTKFSNAPSDVLNHFI---QRNSPQPNILRYGVCGYLSRSIPVISA 1011

  Fly   680 EQLEVEQEQQQQQQQHPFDSSL-----SPISAGKTAEA-STDPDNL-----------DGVTE--- 724
            .:|.|      ....|| .|||     |.|||||.... ....|||           |..:|   
pombe  1012 CELVV------NNFLHP-QSSLYCVLDSDISAGKNNRVLKFVYDNLASCLAHEINAADSSSEQIC 1069

  Fly   725 -------LRLEQ-------YEIHIERTAAGLGLSIAGGKGSTPFKGDDDGIFIS--RVTEAG-PA 772
                   |||.:       |::.               |.|   :||.|..:::  .::|.| ..
pombe  1070 NALRRGFLRLNKKLGNVIHYDLR---------------KSS---EGDVDSNYVTTMNISEKGYSM 1116

  Fly   773 DLAGLKVGDKVIKVNGIVVVDADHYQAVQVLKACGAVLVLVVQR---EVTRL-IGHPVFSED--- 830
            |.:.|.:|..:|.|   .|.|...:.|     ..|..:.::..|   |.|.| :.|.|::.|   
pombe  1117 DSSCLDIGVSIILV---YVRDTRAFVA-----NVGTSMAIMSTRNDSEPTTLSVMHDVYNRDEIR 1173

  Fly   831 ------GSVS-QI-SVETRPL--VADAPPAASISH--ERYIPAPIE--IVPQQQHLQQQQQQPIQ 881
                  |.:| :| |..||.:  ::..|...::.:  .:|:....|  |:..|:......::.:.
pombe  1174 RIVDSCGFISGEIKSTTTRAIGRLSQFPGVQAVPYVNVQYLSELNEFIILANQEFWSVLSKRTVI 1238

  Fly   882 QVAPTHSYSGNVFATPTAAQTVQPAVSAAPNGLL----LNG--REAPLSYIQL---HTTLIRDQI 937
            .|...:.:|..:.:|......:  |..|..|.|:    |||  .|..|::.||   ..||...:.
pombe  1239 DVVRANRHSPLLASTKLRDYAI--AYGAEKNVLVVIVELNGLFEENSLNFNQLRGDEKTLAISEK 1301

  Fly   938 GQGLGF--------SIA--GGKGSPPFKDDCDGIFISRITEGGLAYRDGKIMVGDRVMAIN---- 988
            ...:.|        |:|  ..:.|||  ..|..:..:.|....|.:....|.:...:...|    
pombe  1302 NDNMSFVQDLPDDSSLARMNREVSPP--KGCIAMVFTDIKNSTLLWERHPIAMRSAIKTHNTIMR 1364

  Fly   989 ------GNDMTEAHHDAAVACLTE--------------------PQRFV-----RLVLQRE---- 1018
                  |....:...||.:.|...                    |...|     ||||..:    
pombe  1365 RQLRATGGYEVKTEGDAFMVCFQTVPAALLWCFSVQLQLLSADWPNEIVESVQGRLVLGSKNEVL 1429

  Fly  1019 YRG--------------PLEP---------PTSPRSPAVLNSLSPSGYLANRPANFSRSVVEVEQ 1060
            |||              .|:|         |...|:..|: |::..|.:|     .|..||.|..
pombe  1430 YRGLSVRIGVNYGVTVSELDPITRRMDYYGPVVNRTSRVV-SVADGGQIA-----VSAEVVSVLN 1488

  Fly  1061 PYKYNTLAT--------------------------------TTPTPKPTVPASISNNNNTLPSSK 1093
            .....|:::                                ||.......|..:......|..|:
pombe  1489 QLDSETMSSEKTNVNEMEVRALKQIGYIIHNLGEFKLKGLDTTEMISLVYPVQLQGRLERLIKSR 1553

  Fly  1094 TNGFATAAAATIDSSTGQPVPAPRRTNSV-PM----GDGDIGAGSTTSGDSGEAQPSSLRPLTSD 1153
            :.|..||...|   .|..||.:  |:||: ||    .|.....|.  .|.||:...||||.::..
pombe  1554 SLGTPTALPET---QTYTPVRS--RSNSLRPMLARLSDSKSVHGE--EGGSGKRSVSSLRNVSPS 1611

  Fly  1154 D 1154
            :
pombe  1612 E 1612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 82/289 (28%)
leucine-rich repeat 18..38 CDD:275380 5/19 (26%)
LRR_8 37..95 CDD:290566 18/58 (31%)
leucine-rich repeat 39..61 CDD:275380 8/22 (36%)
leucine-rich repeat 62..84 CDD:275380 5/21 (24%)
LRR_8 84..138 CDD:290566 19/56 (34%)
leucine-rich repeat 85..107 CDD:275380 8/24 (33%)
leucine-rich repeat 108..130 CDD:275380 5/21 (24%)
LRR_8 129..187 CDD:290566 23/57 (40%)
leucine-rich repeat 131..153 CDD:275380 7/21 (33%)
leucine-rich repeat 154..176 CDD:275380 8/21 (38%)
leucine-rich repeat 177..199 CDD:275380 9/22 (41%)
LRR_8 198..256 CDD:290566 17/76 (22%)
leucine-rich repeat 200..222 CDD:275380 4/21 (19%)
leucine-rich repeat 223..245 CDD:275380 6/23 (26%)
LRR_8 267..325 CDD:290566 11/57 (19%)
leucine-rich repeat 269..289 CDD:275380 3/19 (16%)
leucine-rich repeat 292..314 CDD:275380 4/21 (19%)
leucine-rich repeat 315..337 CDD:275380 6/21 (29%)
LRR_4 337..375 CDD:289563 12/47 (26%)
leucine-rich repeat 361..382 CDD:275380 6/20 (30%)
PDZ 728..816 CDD:214570 17/97 (18%)
PDZ_signaling 931..1016 CDD:238492 22/129 (17%)
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
cyr1NP_596159.1 Ad_cyc_g-alpha 155..200 CDD:129025
UBQ 292..387 CDD:294102
leucine-rich repeat 409..430 CDD:275380 5/19 (26%)
leucine-rich repeat 431..454 CDD:275380 8/22 (36%)
LRR_RI <441..616 CDD:238064 55/175 (31%)
leucine-rich repeat 455..477 CDD:275380 5/21 (24%)
LRR_8 476..537 CDD:290566 19/60 (32%)
leucine-rich repeat 478..503 CDD:275380 8/24 (33%)
leucine-rich repeat 504..526 CDD:275380 5/21 (24%)
leucine-rich repeat 527..549 CDD:275380 7/21 (33%)
LRR_8 548..607 CDD:290566 22/58 (38%)
leucine-rich repeat 550..572 CDD:275380 8/21 (38%)
leucine-rich repeat 573..596 CDD:275380 9/22 (41%)
leucine-rich repeat 597..618 CDD:275380 4/21 (19%)
leucine-rich repeat 661..684 CDD:275380 5/22 (23%)
leucine-rich repeat 685..707 CDD:275380 3/21 (14%)
leucine-rich repeat 708..730 CDD:275380 4/21 (19%)
LRR_RI <724..941 CDD:238064 52/314 (17%)
leucine-rich repeat 754..783 CDD:275380 8/28 (29%)
leucine-rich repeat 784..807 CDD:275380 7/29 (24%)
leucine-rich repeat 808..831 CDD:275380 4/30 (13%)
LRR_8 832..889 CDD:290566 17/88 (19%)
leucine-rich repeat 832..855 CDD:275380 6/41 (15%)
leucine-rich repeat 856..877 CDD:275380 4/20 (20%)
leucine-rich repeat 879..901 CDD:275380 7/30 (23%)
leucine-rich repeat 902..930 CDD:275380 5/70 (7%)
PP2C 1032..1268 CDD:278884 54/263 (21%)
CYCc 1300..1488 CDD:214485 36/195 (18%)
Nucleotidyl_cyc_III 1323..1519 CDD:299850 34/203 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47116
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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