DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and Lrrc8a

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_808393.1 Gene:Lrrc8a / 241296 MGIID:2652847 Length:810 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566
leucine-rich repeat 131..153 CDD:275380
leucine-rich repeat 154..176 CDD:275380
leucine-rich repeat 177..199 CDD:275380
LRR_8 198..256 CDD:290566
leucine-rich repeat 200..222 CDD:275380
leucine-rich repeat 223..245 CDD:275380
LRR_8 267..325 CDD:290566
leucine-rich repeat 269..289 CDD:275380
leucine-rich repeat 292..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
Lrrc8aNP_808393.1 Pannexin_like 1..340 CDD:403656
LRR 1. /evidence=ECO:0000255 399..422
leucine-rich repeat 420..447 CDD:275380
LRR 2. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 423..445
LRR 3. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 447..468
leucine-rich repeat 448..470 CDD:275380
LRR 4. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 469..492
leucine-rich repeat 471..494 CDD:275380
LRR 5. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 493..515
leucine-rich repeat 495..517 CDD:275380
LRR <514..789 CDD:227223
leucine-rich repeat 518..545 CDD:275380
LRR 6. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 518..542
LRR 7. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 543..565
leucine-rich repeat 546..568 CDD:275380
LRR 8. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 567..589
leucine-rich repeat 569..592 CDD:275380
LRR 9. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 590..613
leucine-rich repeat 593..615 CDD:275380
LRR 10. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 614..637
leucine-rich repeat 616..640 CDD:275380
LRR 11. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 639..661
leucine-rich repeat 641..663 CDD:275380
LRR 12. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 662..684
leucine-rich repeat 664..686 CDD:275380
LRR 13. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 686..707
leucine-rich repeat 687..709 CDD:275380
Di-leucine motif. /evidence=ECO:0000250|UniProtKB:Q8IWT6 706..707
LRR 14. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 708..730
leucine-rich repeat 710..732 CDD:275380
LRR 15. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 732..753
leucine-rich repeat 733..755 CDD:275380
LRR 16. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 754..776
LRR 17. /evidence=ECO:0000255, ECO:0000305|PubMed:29769723 778..801
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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