Sequence 1: | NP_001163746.1 | Gene: | scrib / 44448 | FlyBaseID: | FBgn0263289 | Length: | 2585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001362181.1 | Gene: | let-413 / 179171 | WormBaseID: | WBGene00002632 | Length: | 706 | Species: | Caenorhabditis elegans |
Alignment Length: | 854 | Identity: | 264/854 - (30%) |
---|---|---|---|
Similarity: | 400/854 - (46%) | Gaps: | 191/854 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FKCIPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLG 66
Fly 67 LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNL 131
Fly 132 TVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGY 196
Fly 197 LPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPD 261
Fly 262 GIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALE 326
Fly 327 YLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSL-VNLQLKAVWLSE 390
Fly 391 NQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARDLESDSEPFEEREPSRTV-----VKF 450
Fly 451 SEEA----TQEKETP-----FVRQNTPHPKDLKAKAQKLKVERSRNEEHANLVTLPEENGTKLAE 506
Fly 507 TPTETRTIANNHQQQPHPVQQPIVGVNSKQPVVVGVVTPTTTTVAPTGVQGGSEGASSTANNVKA 571
Fly 572 ATAAVVAELAATVGGSDEVQDDDEQEDEFESDRRVGFQVEGEDDDFYKRPPKLHRRDTPHHLKNK 636
Fly 637 RVQHLTDKQASEILANALASQERNDTTPQHSLSGKVTSPIEEEEQLEVEQEQQQQQQQHPFDSSL 701
Fly 702 SPISAGKTAEASTDPDNLDGVTELRLEQYEIHIERTAAG-LGLSIAGGKGS--TPFKGDDDGIFI 763
Fly 764 SRVTEAGPADLAGLKVGDKVIKVNGIVVVDADHYQAVQVLKACGAVLVLVVQREVTRLIGHPVFS 828
Fly 829 EDGSVSQIS 837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
scrib | NP_001163746.1 | LRR_RI | 13..283 | CDD:238064 | 111/269 (41%) |
leucine-rich repeat | 18..38 | CDD:275380 | 5/19 (26%) | ||
LRR_8 | 37..95 | CDD:290566 | 26/57 (46%) | ||
leucine-rich repeat | 39..61 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 62..84 | CDD:275380 | 11/21 (52%) | ||
LRR_8 | 84..138 | CDD:290566 | 18/53 (34%) | ||
leucine-rich repeat | 85..107 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 108..130 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 129..187 | CDD:290566 | 30/57 (53%) | ||
leucine-rich repeat | 131..153 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 154..176 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 177..199 | CDD:275380 | 12/21 (57%) | ||
LRR_8 | 198..256 | CDD:290566 | 21/57 (37%) | ||
leucine-rich repeat | 200..222 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 223..245 | CDD:275380 | 9/21 (43%) | ||
LRR_8 | 267..325 | CDD:290566 | 26/57 (46%) | ||
leucine-rich repeat | 269..289 | CDD:275380 | 8/19 (42%) | ||
leucine-rich repeat | 292..314 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 315..337 | CDD:275380 | 11/21 (52%) | ||
LRR_4 | 337..375 | CDD:289563 | 19/37 (51%) | ||
leucine-rich repeat | 361..382 | CDD:275380 | 10/21 (48%) | ||
PDZ | 728..816 | CDD:214570 | 29/90 (32%) | ||
PDZ_signaling | 931..1016 | CDD:238492 | |||
PDZ | 1239..1329 | CDD:214570 | |||
PDZ_signaling | 1336..1425 | CDD:238492 | |||
let-413 | NP_001362181.1 | PLN00113 | 14..>370 | CDD:215061 | 152/356 (43%) |
leucine-rich repeat | 38..60 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 61..83 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 84..106 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 107..129 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 130..152 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 153..175 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 176..198 | CDD:275380 | 12/21 (57%) | ||
leucine-rich repeat | 199..221 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 222..244 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 245..265 | CDD:275380 | 7/19 (37%) | ||
leucine-rich repeat | 268..290 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 291..313 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 314..336 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 360..382 | CDD:275380 | 10/21 (48%) | ||
PDZ_signaling | 574..661 | CDD:238492 | 28/86 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 399 | 1.000 | Inparanoid score | I1100 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto20154 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102427 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2604 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.890 |