DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and magi-1

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_001255577.1 Gene:magi-1 / 178107 WormBaseID:WBGene00010444 Length:1054 Species:Caenorhabditis elegans


Alignment Length:1123 Identity:229/1123 - (20%)
Similarity:366/1123 - (32%) Gaps:374/1123 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 ITPARDLESD-SEPFEEREPSRTVVKFSEEATQEKETPFVRQNTPHPKDLKAKAQKLKVERSRNE 488
            |.||..:..| .|...:|:.|..:.....|...:|..|:   .|..|:           |...:.
 Worm   158 ILPAGAITDDICELLADRKSSGELQTIIRENLYQKTVPY---TTRPPR-----------EGEVDG 208

  Fly   489 EHANLVTLPEENGTKLAETP--TETRTIANNHQQQPHPVQ------QPIVGVNSKQP-------- 537
            ||...|::.:.|  ||.::.  .|..|...:....|.||:      ..::|.....|        
 Worm   209 EHYRFVSVDDFN--KLLDSGDLLENGTYQGHLYGTPRPVECYADDDMMLMGSEGLLPPNWETAYT 271

  Fly   538 -----VVVGVVTPTTTTVAPTGVQGGSEGASSTANNVKAATAAVVAELAATVGGSDEVQDDDEQE 597
                 ..:...|.|||...|..:..|.|                              |.||:..
 Worm   272 ENGDKYFIDHNTGTTTWDDPRELPPGWE------------------------------QVDDQNY 306

  Fly   598 DEFESDRRVGFQVEGEDDDFYKRP----PKLHRRDTPHHLKNKRVQHLTDKQASEILANALASQE 658
            ..|..| .:..:.:      |:||    ......|.|  :|...:...|:...:.|.::..:...
 Worm   307 GTFYVD-HINRKTQ------YERPYGFGGSSATIDQP--VKYGTLPSSTNHNHNNIYSHYNSGTL 362

  Fly   659 RNDTTPQHSLSGKVTSPIE--------EEEQLEVEQEQQQQQQQHPFDSSLSPISAGKTAEASTD 715
            ::.::|:.  ||..:||..        |......:.:...:.    |..|.:|:       .:||
 Worm   363 KSSSSPRD--SGFDSSPTRYRKFGDPPETATSSADYDHHSKM----FSRSSNPL-------FTTD 414

  Fly   716 PDNLDGVTELRLEQYEIHIERTAAGLGLSIAGGKGSTPFKGDDDGIFISRVTEAGPADLAG-LKV 779
            |..|.|      |.....|.:.|.|||.::.|...|:  :| |:.|.:..|...|||...| |:.
 Worm   415 PARLGG------ELISTKIVKGAKGLGFTLIGNDSSS--RG-DEFIQVKSVLSGGPAAANGVLRS 470

  Fly   780 GDKVIKVNGIVVVDADHYQAVQVLKACGAVLVLVVQREVTRLIGHPVFSEDGSVSQISVETRPLV 844
            ||.:::|||.:::.|...:|..|..|......:.:|  |.|  |:.:|.:               
 Worm   471 GDILVRVNGRLLLGATQKEACDVFVAIPVNEAVDIQ--VCR--GYELFID--------------- 516

  Fly   845 ADAPPAASISHERYIPAPIEIVPQQQHLQQQQQQPIQQVAPTHSYSGNVFATPTAAQTVQPAVSA 909
                ||..|..|                                   ||:|.             
 Worm   517 ----PANRIVTE-----------------------------------NVYAA------------- 529

  Fly   910 APNGLLLNGREAPLSYIQLHTTLIRDQIGQGLGFSIAGGKGSPPFKDDCDGIFISRITEGGLAYR 974
                    .:...|..|.:.      :..:|.||:||         |:.:|..|.:|.   ...:
 Worm   530 --------AKSRDLHEIDIF------KGSEGFGFTIA---------DNLNGQRIKKIL---FPSQ 568

  Fly   975 DGKIMVGDRVMAINGNDMTEAHHDAAVACLTEPQRFVRLVLQREYRGPL-----EPPTSPRSPA- 1033
            ...:|.||.::.::|.::....|...|..|.|     |.:   .|||.|     .|.|..|:|: 
 Worm   569 CPNLMEGDTIVELDGRNVRPIPHTQLVDMLRE-----RPI---GYRGKLVVKRGSPKTRSRTPSA 625

  Fly  1034 ----------VLNSLSPSGYLANRPANFSRSVVEVEQPYKYNTL----ATTTPTP--KPTVPASI 1082
                      :::|.:|....:..||....|..|.:|..: |||    |.|:...  ...:||| 
 Worm   626 AFRYGEPQTNMMDSAAPLPVRSKTPAERQTSRTEEDQNVR-NTLQRQPAVTSEWEGMSSAIPAS- 688

  Fly  1083 SNNNNTLPSSKTNGFATAAAATIDSSTGQP-----VPAPRR------------TNSVPMGDGDIG 1130
                ...|||.|.||||.....:.....:|     |...|:            .:..|:..|.|.
 Worm   689 ----RMRPSSTTLGFATPNYIPLSQYNQKPSDLITVSLIRKPVGFGFRLLGGVESKTPLSVGQIV 749

  Fly  1131 AGSTTSGDSGEAQPSSLRPLTSDDFQAMIPAHFLSGGSQHQVHVARPNEVGVSAVTVNVNKPQPD 1195
            .|.....|.         .|...|....|..|.:.|.|..:..|..........|.:.|.:|.  
 Worm   750 IGGAAEEDG---------RLQEGDEIVEIDGHNVEGASHSEAVVLLEAAAQNKHVKLIVRRPS-- 803

  Fly  1196 LPMFPAAPTELGRVTETITKSTFTETVMTRITDNQLAEPLISEEVVLPKNQG-SLGFSIIGGTDH 1259
                ...|...|.:..                    |.|..|.:|:|.:|:. ..|| ::..:.|
 Worm   804 ----RTDPARRGSLNS--------------------AGPSGSYDVLLHRNENDGFGF-VLMSSQH 843

  Fly  1260 SCVPFGTREPGIFISHIVPGGIASKCGKLRMGDRILKVNEADVSKATHQDAVLELLKPGDEIKLT 1324
                    :.|..:..|.||..|::||:|.:|||::.||..|:...:|.|.:..:...|..::||
 Worm   844 --------KNGSTVGQIQPGSPAARCGRLSVGDRVIAVNGIDILSLSHPDTISLIKDSGLSVRLT 900

  Fly  1325 IQ------------------------H-------DPLPPGFQE---------------------- 1336
            |.                        |       .|.||...|                      
 Worm   901 IAPPNTAGPVLPMVSATLGRNFTMNGHYESNYGLPPPPPSVYEKHPPPSYLAFDGLSINDRMSMN 965

  Fly  1337 -----VLLSKAEGERLGMHIKGGLNGQRGNPADPSDEGVFVSKINSVGAARRDGRLKVGMRLLEV 1396
                 |.|.:.. :..|..|:||        .:.....:||.:|...|.|:.||||:||.:|..:
 Worm   966 GNLIDVTLERGT-KGFGFSIRGG--------QEFGSMPLFVLRIADDGPAKADGRLQVGDQLTTI 1021

  Fly  1397 NGHSLLGASHQDAVNVLR 1414
            ||.|..|.||.||:.:::
 Worm  1022 NGQSTKGMSHDDAIRIIK 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566
leucine-rich repeat 131..153 CDD:275380
leucine-rich repeat 154..176 CDD:275380
leucine-rich repeat 177..199 CDD:275380
LRR_8 198..256 CDD:290566
leucine-rich repeat 200..222 CDD:275380
leucine-rich repeat 223..245 CDD:275380
LRR_8 267..325 CDD:290566
leucine-rich repeat 269..289 CDD:275380
leucine-rich repeat 292..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570 26/88 (30%)
PDZ_signaling 931..1016 CDD:238492 18/84 (21%)
PDZ 1239..1329 CDD:214570 27/121 (22%)
PDZ_signaling 1336..1425 CDD:238492 27/106 (25%)
magi-1NP_001255577.1 NK 180..>244 CDD:302627 15/79 (19%)
WW 263..293 CDD:238122 6/29 (21%)
WW 294..323 CDD:278809 8/65 (12%)
PDZ 421..510 CDD:214570 29/95 (31%)
PDZ_signaling 535..600 CDD:238492 18/82 (22%)
PDZ_signaling 717..800 CDD:238492 15/91 (16%)
PDZ_signaling 822..902 CDD:238492 25/88 (28%)
PDZ_signaling 968..1049 CDD:238492 26/81 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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