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Protein Alignment scrib and Y42G9A.3

DIOPT Version :9

Sequence 1:	NP_001163746.1	Gene:	scrib / 44448	FlyBaseID:	FBgn0263289	Length:	2585	Species:	Drosophila melanogaster
Sequence 2:	NP_001022864.1	Gene:	Y42G9A.3 / 175865	WormBaseID:	WBGene00021533	Length:	375	Species:	Caenorhabditis elegans

Alignment Length:	384	Identity:	105/384 - (27%)
Similarity:	160/384 - (41%)	Gaps:	72/384 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    83 ENLVELDVSRNDIP-----DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLT 142
            :.||..|....:||     :.|::....|:::..|.:.|....| .|.:...|::||.::..||:
Worm    33 DELVLHDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVIL-RGLTTFNNVSVLDVSFNSLS 96

  Fly   143 TLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207
            .||.|.|:|:.|.:|..|.|||:|||:.:..|..|:.|.|..|.:|.:||.:..:..|..|.|..
Worm    97 ALPEDIGTLSSLTTLIARNNLLEHLPKGLQLLENLEHLYLSGNRLEYVPPVILTMRKLKTLHLGG 161

  Fly   208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272
            |.:...|..:.:||.|..|.:..|||.|:|..|..|..|.:|.|..|:||.:|..:..|..|..|
Worm   162 NYIDSCPSNISVLTLLRVLYLGGNRLREIPASIGCLDELENLGLCDNILETIPSTLGDLHYLETL 226

  Fly   273 KLDQNRLQRLNDTLGNCENMQELILTEN-----FLSEL---PASIGQM---TKLNNLNVDRNALE 326
            .|..|||:.|...:.|...:|:|.|..|     |:..:   |.|:.::   |...|.:...|..|
Worm   227 SLHNNRLRTLPTDILNLRRLQQLSLRNNPLVHSFVHNMDLAPPSLKELSGRTVRQNYHKVPNLDE 291

  Fly   327 YLPLEI-------GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLK 384
            .||.::       .||.|               ||   |           |.:|....:.:  :|
Worm   292 ILPSDLVAYLGSACQCVN---------------PE---C-----------QGVYFDARVEH--IK 325

  Fly   385 AVWLSENQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARDLESDSEPFEEREP 443
            .|........||:.|........|                 .|:.|.::.||..||.||
Worm   326 FVDFCGKYRVPLMQFLCSPRCSAG-----------------VPSVDYDTSSESEEEIEP 367

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.