DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and LRRC15

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:NP_001128529.2 Gene:LRRC15 / 131578 HGNCID:20818 Length:587 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566
leucine-rich repeat 131..153 CDD:275380
leucine-rich repeat 154..176 CDD:275380
leucine-rich repeat 177..199 CDD:275380
LRR_8 198..256 CDD:290566
leucine-rich repeat 200..222 CDD:275380
leucine-rich repeat 223..245 CDD:275380
LRR_8 267..325 CDD:290566
leucine-rich repeat 269..289 CDD:275380
leucine-rich repeat 292..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
LRRC15NP_001128529.2 LRR_8 60..119 CDD:290566
LRR_RI 63..309 CDD:238064
LRR_8 88..167 CDD:290566
leucine-rich repeat 88..108 CDD:275380
leucine-rich repeat 109..156 CDD:275380
leucine-rich repeat 157..180 CDD:275380
LRR_8 180..239 CDD:290566
leucine-rich repeat 181..204 CDD:275380
leucine-rich repeat 205..228 CDD:275380
LRR_8 228..287 CDD:290566
leucine-rich repeat 229..252 CDD:275380
leucine-rich repeat 253..276 CDD:275380
leucine-rich repeat 277..300 CDD:275380
LRR_8 299..359 CDD:290566
LRR_4 299..340 CDD:289563
leucine-rich repeat 301..324 CDD:275380
LRR_4 324..364 CDD:289563
leucine-rich repeat 325..348 CDD:275380
leucine-rich repeat 349..370 CDD:275380
LRR_8 372..430 CDD:290566
leucine-rich repeat 373..393 CDD:275380
leucine-rich repeat 397..418 CDD:275380
TPKR_C2 429..>468 CDD:301599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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