DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and AgaP_AGAP004941

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_315033.3 Gene:AgaP_AGAP004941 / 1275747 VectorBaseID:AGAP004941 Length:322 Species:Anopheles gambiae


Alignment Length:296 Identity:75/296 - (25%)
Similarity:121/296 - (40%) Gaps:65/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 LTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETI-----SQLTKLKRLDLGDNEIEDL 190
            |:.|.:.|..:.::||....|..||.||:.::.:    ||:     |:||.|:.|:|.||:|..|
Mosquito    29 LSFLTITDSRMKSVPATMAHLVVLEMLEISKSSI----ETVNLNLFSKLTHLRHLNLCDNKILFL 89

  Fly   191 PPYL-----GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLD 250
              :|     |....|.:|:|..|             .||.:|:         ...|.:..|..||
Mosquito    90 --HLSDAAEGNFAQLRDLFLSGN-------------LLTTIDL---------RWFSNMKLLQTLD 130

  Fly   251 LAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIG-QMTK 314
            |.:|.:..:...:...| |..|.|.:||::.||....|..::...:|:.|.|..||:.:. .|..
Mosquito   131 LHRNRIRRMQGALVSNS-LKFLDLSENRIETLNCCEWNITSLNRFMLSSNELVTLPSCLPLTMPN 194

  Fly   315 LNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLV 379
            :..|.:.||||    .:.....||..|..                 |..||:|.|:|....:..|
Mosquito   195 VMYLILQRNAL----TDGNSWYNLFTLER-----------------LFQLDISYNRLTKAVFDNV 238

  Fly   380 NLQLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCY 415
            :|.|..:.|..|..:.|..    ..|:.|..:|:.:
Mosquito   239 SLSLSILGLQNNNIKVLSV----PAADYGLNILASF 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 43/161 (27%)
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566 2/6 (33%)
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566 20/60 (33%)
leucine-rich repeat 131..153 CDD:275380 6/21 (29%)
leucine-rich repeat 154..176 CDD:275380 8/26 (31%)
leucine-rich repeat 177..199 CDD:275380 9/26 (35%)
LRR_8 198..256 CDD:290566 13/57 (23%)
leucine-rich repeat 200..222 CDD:275380 4/21 (19%)
leucine-rich repeat 223..245 CDD:275380 4/21 (19%)
LRR_8 267..325 CDD:290566 18/58 (31%)
leucine-rich repeat 269..289 CDD:275380 7/19 (37%)
leucine-rich repeat 292..314 CDD:275380 6/22 (27%)
leucine-rich repeat 315..337 CDD:275380 5/21 (24%)
LRR_4 337..375 CDD:289563 9/37 (24%)
leucine-rich repeat 361..382 CDD:275380 7/20 (35%)
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
AgaP_AGAP004941XP_315033.3 LRR_8 32..86 CDD:290566 19/57 (33%)
leucine-rich repeat 52..75 CDD:275380 8/26 (31%)
LRR_8 74..136 CDD:290566 23/85 (27%)
leucine-rich repeat 76..101 CDD:275380 9/26 (35%)
leucine-rich repeat 102..125 CDD:275380 8/44 (18%)
leucine-rich repeat 126..147 CDD:275380 5/20 (25%)
LRR_9 <128..225 CDD:258718 29/118 (25%)
leucine-rich repeat 148..170 CDD:275380 8/21 (38%)
leucine-rich repeat 171..194 CDD:275380 6/22 (27%)
leucine-rich repeat 195..219 CDD:275380 8/27 (30%)
leucine-rich repeat 220..241 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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