DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and scrib

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_031759452.1 Gene:scrib / 100494581 XenbaseID:XB-GENE-1018501 Length:1986 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380
LRR_8 84..138 CDD:290566
leucine-rich repeat 85..107 CDD:275380
leucine-rich repeat 108..130 CDD:275380
LRR_8 129..187 CDD:290566
leucine-rich repeat 131..153 CDD:275380
leucine-rich repeat 154..176 CDD:275380
leucine-rich repeat 177..199 CDD:275380
LRR_8 198..256 CDD:290566
leucine-rich repeat 200..222 CDD:275380
leucine-rich repeat 223..245 CDD:275380
LRR_8 267..325 CDD:290566
leucine-rich repeat 269..289 CDD:275380
leucine-rich repeat 292..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
LRR_4 337..375 CDD:289563
leucine-rich repeat 361..382 CDD:275380
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
scribXP_031759452.1 leucine-rich repeat 115..138 CDD:275380
LRR <138..403 CDD:227223
leucine-rich repeat 139..161 CDD:275380
leucine-rich repeat 162..184 CDD:275380
leucine-rich repeat 185..230 CDD:275380
leucine-rich repeat 231..253 CDD:275380
leucine-rich repeat 254..276 CDD:275380
leucine-rich repeat 277..299 CDD:275380
leucine-rich repeat 300..322 CDD:275380
leucine-rich repeat 323..345 CDD:275380
internalin_A 343..>492 CDD:380193
leucine-rich repeat 369..391 CDD:275380
leucine-rich repeat 392..414 CDD:275380
leucine-rich repeat 415..437 CDD:275380
leucine-rich repeat 438..460 CDD:275380
leucine-rich repeat 461..481 CDD:275380
PDZ 804..892 CDD:214570
PDZ 937..1028 CDD:214570
PDZ_signaling 1083..1171 CDD:238492
PDZ_signaling 1181..1270 CDD:238492
AbLIM_anchor 1887..>1920 CDD:406566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6395
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 772 1.000 Inparanoid score I529
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D148064at33208
OrthoFinder 1 1.000 - - FOG0005473
OrthoInspector 1 1.000 - - otm49385
Panther 1 1.100 - - LDO PTHR23119
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5064
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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