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Protein Alignment scrib and slitrk5

DIOPT Version :9

Sequence 1:	NP_001163746.1	Gene:	scrib / 44448	FlyBaseID:	FBgn0263289	Length:	2585	Species:	Drosophila melanogaster
Sequence 2:	XP_002940152.1	Gene:	slitrk5 / 100494014	XenbaseID:	XB-GENE-6034846	Length:	881	Species:	Xenopus tropicalis

Alignment Length:	715	Identity:	152/715 - (21%)
Similarity:	229/715 - (32%)	Gaps:	242/715 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    37 RTLEELFLDANHIRDL-PKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIP- 99
            :.||.|.:|.|.|..: |..|.|||.|:.|.|:||.:..||.::..|..|..||:..|.:..:|
Frog   153 QNLEYLQVDYNFIISIEPNTFSRLHSLQVLILNDNLLSTLPTNLFRFVPLTHLDLRGNRLKVLPY 217

  Fly   100 -------DDIKHLQ------------------------SLQVAD--------------------- 112
                   |.:..||                        |..|.|
Frog   218 VGLLEHMDKVVELQLEENPWNCSCELIALKDWLYSISYSALVGDVVCETPFRLYGRDLDEISKQE 282

  Fly   113 -----------------------FSSNPI------------------------------------ 118
                                   |.:.|.
Frog   283 LCPRKLISIYEMRPQIPRSTSEYFHTTPASVNSGATISSSVYKNLTKPKSTRQPNRSKGRTTSHR 347

  Fly   119 PKLPSGFS-----QLK-------------NLTV--LGLN----------------------DMSL 141
            |.:.||:|     |.|             ||.:  ||||                      .|.|
Frog   348 PPIDSGYSISIAYQTKSPVPLECPTNCTCNLQISNLGLNVNCQERKIQSISDLHPKPYNPKKMYL 412

  Fly   142 T------TLPADFGSLTQLESLELRENLLKHLPE-TISQLTKLKRLDLGDNEIEDLPPYLGY-LP 198
            |      ....||...|.|:.|.|..|.:..:.: ....||.|:||.|..|.||.|.|.|.| |.
Frog   413 TGNYIALVRRTDFIDSTGLDLLHLGNNRISVIQDRAFGDLTNLRRLYLNGNSIEKLTPELFYGLQ 477

  Fly   199 GLHELWLDHNQLQRLPP-ELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEAL--P 260
            .|..|:|.:|.::.:.| ....:..|..|.::.|.::.||:.|...::|:.|:|..||...|  .
Frog   478 SLQYLFLQYNSIKEIEPGTFNFVPNLHLLFLNNNLMKHLPSNIFSGLNLSRLNLRSNLFSHLTVS 542

  Fly   261 DGIAKLSRLTILKLDQNRLQRLNDTLGN---CENMQELILTENFLSELPASIG----QMTKLNNL 318
            .|:.:|..|..:.|.:|......:.||.   .|.:...:|.::.:.:.|.:..    :..|...|
Frog   543 GGLDQLKSLVQIDLHENPWDCTCNVLGMKLWLEQLSVGVLVDDVICKSPPNFALKEMRAIKPELL 607

  Fly   319 NVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQL 383
            ..|.:|:|               :........||.| ....::|....:.|....:|.|::.|.|
Frog   608 CPDHSAME---------------ATTSTPSPVLPSE-STTALIHPSKFNNNSSSSVPLSVLILSL 656

  Fly   384 KAVWLSENQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQPITPARDLESDSEPFEEREPSRTVV 448
                        ||.|........|..||   ::.:::.....||....||...|     :....
Frog   657 ------------LLVFIMSVFVAAGLFVL---VMKRRKKNQNDPASTNNSDVSSF-----NMQYS 701

  Fly   449 KFSEEATQEKETP--FVRQNTPHPKDLKAKAQKLKVERSRN----EEHANL----VT----LPEE 499
            .:|.....:.:||  .|.:..|||.....|.   .:.|||.    |::.:|    ||    |.||
Frog   702 VYSNRPLPKVKTPAGHVYEYIPHPLGHMCKN---PIYRSREGNSVEDYKDLHELKVTYRDHLEEE 763

  Fly   500 NGTKLAETPTETRTIANNHQQQP------------HPVQQPIVGVNSKQPVVVGVVTPTTTTVAP 552
            ..:.|..|.....||.:..:..|            .|.:.|..|.|    :......|.|.|.||
Frog   764 RDSSLRGTSYSVSTIESRVELSPVQDTDRVYRGILEPDKGPSPGPN----IDYKYSNPNTFTYAP 824

Fly 553 552
Frog 825 824

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.