back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scrib and lrrc10

DIOPT Version :9

Sequence 1:	NP_001163746.1	Gene:	scrib / 44448	FlyBaseID:	FBgn0263289	Length:	2585	Species:	Drosophila melanogaster
Sequence 2:	XP_002938552.2	Gene:	lrrc10 / 100492390	XenbaseID:	XB-GENE-5959561	Length:	318	Species:	Xenopus tropicalis

Alignment Length:	267	Identity:	73/267 - (27%)
Similarity:	125/267 - (46%)	Gaps:	26/267 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    94 DIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158
            ::.::|.|       ::.|.||..:.:.|........|..|.|:|.:|.|||.:...|..|:.|.
Frog    52 ELEEMPVD-------KMVDLSSKHLRRFPLRVCAFTELVKLYLSDNNLNTLPPELELLQSLQILA 109

  Fly   159 LRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223
            |..|..|.||:.:..|.:|..|.||:|.:.||||.|.:|..|..||::.|....||..:..||.|
Frog   110 LDFNNFKVLPQVVCTLKQLSILYLGNNRLRDLPPELCFLKNLQTLWIESNYFTHLPVVVCELTLL 174

  Fly   224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGN 288
            ..|....|.:.:||||:..|..|..:.::..||...|..:.::..|.::.:|:|.: |...:|.:
Frog   175 KTLHAGSNPIRQLPNELKNLKELRSIWMSGTLLTEFPLVLLEMPFLDVIDVDRNGI-RFFPSLVH 238

  Fly   289 CENMQELILTENFLSELP------ASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNK 347
            .::::.:|...|.....|      ..:|:.::.:.....|:..| ..||          :.:|||
Frog   239 MQSLKLVIYDHNPCQNAPKVAKGVRRVGRWSEESPEPKKRSEAE-AELE----------NAKDNK 292

  Fly   348 -LKKLPP 353
             ::.|||
Frog   293 EVQALPP 299

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.