DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and pidd1

DIOPT Version :10

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_002937546.2 Gene:pidd1 / 100488788 XenbaseID:XB-GENE-990212 Length:909 Species:Xenopus tropicalis


Alignment Length:818 Identity:179/818 - (21%)
Similarity:297/818 - (36%) Gaps:239/818 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LSDNEIG------------RLPPDIQNFENLVE-LDVSRNDIPDIPDDIKHLQSLQVADFSSNPI 118
            |:||.|.            :|..|.:....||| |.::.|| |.||..:..|.|           
 Frog    24 LADNRITLDIVPNGCRFFLQLTNDPRCHRELVEFLRLNTND-PLIPQALDVLHS----------- 76

  Fly   119 PKLPSGFSQLKNLTVLGLNDMS---------LTTLPADFGSLTQLESLELRENLLKHLPETISQL 174
                  ::.||:|.:.|.:::.         ||:||::..||:.|..|:|..|.|..||..::.|
 Frog    77 ------YTGLKSLVLKGGHELDECGKTKSGLLTSLPSELCSLSNLHHLDLSFNSLTELPLCVTSL 135

  Fly   175 TKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE 239
            :.|..|.|..|:|..||..:..|..|..|.:..|.|..:|.|:|.|.||..||:|||:||.||..
 Frog   136 SCLSSLLLCYNQIGTLPDTISNLRNLELLSMMFNLLSVIPGEIGQLRKLKRLDLSENKLETLPET 200

  Fly   240 ISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSE 304
            |.||...|:|||:                                  |||            |.|
 Frog   201 IGGLQECTELDLS----------------------------------GNC------------LME 219

  Fly   305 LPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGN 369
            ||.::..:..|..|::..|.|..:|:.:.....|..|.|::|:|:.:|.|:.||..:|   :.||
 Frog   220 LPETMCHLVSLQQLHLHSNLLISVPVGLAVLPFLKRLDLKNNQLRYVPEEIMNCPCVH---LQGN 281

  Fly   370 QLLYLPYSLVN-----------LQLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYLLPQQEYQ 423
                 |..:..           |:.|.::|:......|:|  ||          .|.:......|
 Frog   282 -----PIGIAEPTPSTEDQVPVLKSKEIYLTSEDKSFLVT--PD----------GCRVFLPWGLQ 329

  Fly   424 PITPARDLESD-SEPFEEREPSRTVVKFSE----------------EATQEKE--TP-FVRQNTP 468
            ...|...:.|: :..|:...|.|..||...                :..|:.|  .| ||:|:. 
 Frog   330 FCFPHGAVSSNVTIYFQILPPDREHVKLGHHDVLLSYTLELQPHDIQFNQDVEICIPYFVKQSM- 393

  Fly   469 HPKDLKAKAQKLKV------ERSRNEEHANLVTLPEENGTKLAETPTETRTIA------------ 515
                .:.|.:.|:|      .|:..:....:.|...|:.|.||.|....|.:|            
 Frog   394 ----RRRKQESLEVPTILGTPRTLRKREVVIRTYSGEDWTDLATTSCTKRNLAICKVPHFSWFFV 454

  Fly   516 -----NNHQQQP-------HPVQQPI-----VGVNSKQPVVVGVVTPTTTTVAPTGVQGGSEGAS 563
                 .:..|.|       ..|.|.|     .|...:...:...|.|.:|....: :.|.|:.|:
 Frog   455 VSRLVKDQCQVPKDGEVLFSSVDQNIRIEFPPGATEETRTISMQVLPVSTADFQS-ITGDSQSAT 518

  Fly   564 STANNVKAATAA-----VVAELAATVGGSDEVQD---------DDEQEDEFESDRRVGFQVEGED 614
            |....:..:::|     |..:|....|.:.:..|         |.:.::..:...:|.|::    
 Frog   519 SPLLCLSQSSSANFLCPVKIQLPLPPGVTGDTLDRSRLVLLHGDPQAQNWTDITGQVEFEI---- 579

  Fly   615 DDFYKRPPKLHRRDTPHHLKNKRVQHLTDKQASEILANA-----------LASQERNDTTPQHSL 668
                   ..::.|....|.....:.:.|.....||..|.           :|.|.:.|  |:..|
 Frog   580 -------THIYARFQVDHFSWYWLWYTTKTYIGEIAKNVYTRLRMSQVNFVALQRKRD--PEQVL 635

  Fly   669 SGKVTSPIEEEEQLEVEQEQQQQQQQHPFDSSLSPISAGKTAEA---------STDPDNLDG--- 721
            ...|     .:::::...::.:.:.:.|..|.|..|..|:...|         |..||.::|   
 Frog   636 LQCV-----PKQKVDTTMKKLKDRYKGPEPSDLVEIVEGEQFFAAFEQGLQLHSDRPDCVNGKIS 695

  Fly   722 -VTELRLEQY-EIHIERTAAGLGLSIAGG----KGSTP 753
             |...|::.. |:::...|......:.|.    :||.|
 Frog   696 FVFYSRMKNIKEVYVTSQADRKEKDVKGQVSFYRGSVP 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:404697 11/40 (28%)
leucine-rich repeat 39..61 CDD:275380
leucine-rich repeat 62..84 CDD:275380 6/28 (21%)
LRR 67..408 CDD:443914 101/373 (27%)
leucine-rich repeat 85..107 CDD:275380 10/22 (45%)
leucine-rich repeat 108..130 CDD:275380 1/21 (5%)
leucine-rich repeat 131..153 CDD:275380 8/30 (27%)
leucine-rich repeat 154..176 CDD:275380 8/21 (38%)
leucine-rich repeat 177..199 CDD:275380 8/21 (38%)
leucine-rich repeat 200..222 CDD:275380 8/21 (38%)
leucine-rich repeat 223..245 CDD:275380 13/21 (62%)
leucine-rich repeat 269..289 CDD:275380 1/19 (5%)
leucine-rich repeat 292..314 CDD:275380 4/21 (19%)
leucine-rich repeat 315..337 CDD:275380 5/21 (24%)
leucine-rich repeat 361..382 CDD:275380 4/31 (13%)
PDZ1_Scribble-like 730..816 CDD:467188 6/29 (21%)
PDZ2_Scribble-like 927..1019 CDD:467187
PDZ3_Scribble-like 1238..1327 CDD:467186
PDZ4_Scribble-like 1331..1428 CDD:467185
pidd1XP_002937546.2 leucine-rich repeat 23..46 CDD:275380 5/21 (24%)
LRR 54..>269 CDD:443914 81/278 (29%)
leucine-rich repeat 55..76 CDD:275380 9/21 (43%)
leucine-rich repeat 80..114 CDD:275380 10/33 (30%)
leucine-rich repeat 115..160 CDD:275380 16/44 (36%)
leucine-rich repeat 161..183 CDD:275380 8/21 (38%)
leucine-rich repeat 184..206 CDD:275380 13/21 (62%)
leucine-rich repeat 207..229 CDD:275380 11/67 (16%)
leucine-rich repeat 230..252 CDD:275380 5/21 (24%)
ZU5 312..388 CDD:470600 16/87 (18%)
Peptidase_S68 428..457 CDD:463098 6/28 (21%)
DD 792..873 CDD:472698
Blue background indicates that the domain is not in the aligned region.

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