DRSC/TRiP Functional Genomics Resources

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Protein Alignment scrib and si:dkey-182i3.11

DIOPT Version :9

Sequence 1:NP_001163746.1 Gene:scrib / 44448 FlyBaseID:FBgn0263289 Length:2585 Species:Drosophila melanogaster
Sequence 2:XP_021322095.1 Gene:si:dkey-182i3.11 / 100334238 ZFINID:ZDB-GENE-121214-258 Length:710 Species:Danio rerio


Alignment Length:463 Identity:141/463 - (30%)
Similarity:207/463 - (44%) Gaps:41/463 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LEELFLDANHIRDLPKNFFR-LHRLRKLGLSDNEIGRLPPDI-QNFENLVELDVSRNDIPDIPDD 101
            |.:|:|..|.::.:....|: ...|..|.|..|.:..:|..: |...||..|.:.:|||..|||:
Zfish   225 LAKLYLSKNKLKSVGNGSFKGATGLNHLDLGLNGLAGIPTIVLQETSNLTSLYLQKNDITSIPDN 289

  Fly   102 I-KHLQSLQVADFSSNPIPKLPSG-FSQLKNLTVLGLNDMSLTTLPAD-FGSLTQLESLELRENL 163
            : ..:.||:..|.|.|.:..:.:| |..|..|..|.|:...|.||... |..|.:||:|.|..|.
Zfish   290 VFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYLDLSFNQLQTLTQHVFEDLGKLENLNLYHNK 354

  Fly   164 LKHLPETI-SQLTKLKRLDLGDNEIEDLPPYLGY-LPGLHELWLDHNQLQRLPPE-LGLLTKLTY 225
            |..||..: ..||.||.|.|..|.|..:||.|.: |..|.:|.||:|.:.:|... ...|.:|..
Zfish   355 LTSLPNNMFKNLTMLKELQLDSNNISVIPPDLFHPLSALKDLQLDNNHISKLHSHTFKKLRQLKQ 419

  Fly   226 LDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPD-GIAKLSRLTILKLDQNRLQRL-NDTLGN 288
            ||:|.|.|.::||.:.. .:|.:|:|..|.:..:.. ....|.||..|||..|.|.:| .:.|.|
Zfish   420 LDISSNDLTKIPNHLFH-KNLKELNLENNHISFISKFSFKNLHRLQSLKLSHNNLSKLYRELLTN 483

  Fly   289 CENMQELILTENFLSELPASIGQMTKLNNLNV---DRNALEY-LPLEIGQCANLGVLSLRDNKLK 349
            ...::||:|.||.:..:|  :|....|.||.|   ..|.:.: ||......:.|..|.|..|.|.
Zfish   484 LTRLRELLLNENQIETIP--VGFFKGLENLRVLDLSNNKMHFILPDAFNDLSALKDLDLSFNFLH 546

  Fly   350 KLPPE----LGNCTVLHVLDVSGNQLLYLPYSLVN--LQLKAVWLSENQSQPLLTFQPDTDAETG 408
            .||.:    |.|.|.||   :..|:|.|||..|.:  :.|:.:.|..|..|.:...|.:...:..
Zfish   547 NLPEDIFASLRNLTKLH---LQNNKLRYLPSRLFSALVGLEELHLDRNYIQRIHPTQFEGLVKLH 608

  Fly   409 EQVLSCYLLPQQEYQPITPARDLES---DSEPFEEREPSRTVV------KFSEEATQEKETPFVR 464
            |..:....|...|...:.|.|.|:.   |..|::    ..|||      .|:......|.||...
Zfish   609 ELDMKSNQLRSMEDGTLMPLRKLKRIHLDGNPWD----CSTVVILYISQWFNNNTQLVKTTPMCS 669

  Fly   465 --QNTPHP 470
              ||..:|
Zfish   670 SGQNLSNP 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scribNP_001163746.1 LRR_RI 13..283 CDD:238064 84/253 (33%)
leucine-rich repeat 18..38 CDD:275380
LRR_8 37..95 CDD:290566 15/57 (26%)
leucine-rich repeat 39..61 CDD:275380 5/22 (23%)
leucine-rich repeat 62..84 CDD:275380 6/22 (27%)
LRR_8 84..138 CDD:290566 20/55 (36%)
leucine-rich repeat 85..107 CDD:275380 8/22 (36%)
leucine-rich repeat 108..130 CDD:275380 7/22 (32%)
LRR_8 129..187 CDD:290566 23/59 (39%)
leucine-rich repeat 131..153 CDD:275380 8/22 (36%)
leucine-rich repeat 154..176 CDD:275380 9/22 (41%)
leucine-rich repeat 177..199 CDD:275380 10/22 (45%)
LRR_8 198..256 CDD:290566 19/58 (33%)
leucine-rich repeat 200..222 CDD:275380 7/22 (32%)
leucine-rich repeat 223..245 CDD:275380 8/21 (38%)
LRR_8 267..325 CDD:290566 22/61 (36%)
leucine-rich repeat 269..289 CDD:275380 8/20 (40%)
leucine-rich repeat 292..314 CDD:275380 7/21 (33%)
leucine-rich repeat 315..337 CDD:275380 7/25 (28%)
LRR_4 337..375 CDD:289563 15/41 (37%)
leucine-rich repeat 361..382 CDD:275380 8/22 (36%)
PDZ 728..816 CDD:214570
PDZ_signaling 931..1016 CDD:238492
PDZ 1239..1329 CDD:214570
PDZ_signaling 1336..1425 CDD:238492
si:dkey-182i3.11XP_021322095.1 PLN00113 97..>617 CDD:331614 124/397 (31%)
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..224 CDD:275380
leucine-rich repeat 225..248 CDD:275380 5/22 (23%)
leucine-rich repeat 249..272 CDD:275380 6/22 (27%)
leucine-rich repeat 273..296 CDD:275380 8/22 (36%)
leucine-rich repeat 297..320 CDD:275380 7/22 (32%)
leucine-rich repeat 321..344 CDD:275380 8/22 (36%)
leucine-rich repeat 345..368 CDD:275380 9/22 (41%)
leucine-rich repeat 369..392 CDD:275380 10/22 (45%)
leucine-rich repeat 393..438 CDD:275380 15/45 (33%)
leucine-rich repeat 417..436 CDD:275380 8/18 (44%)
leucine-rich repeat 439..462 CDD:275380 5/22 (23%)
leucine-rich repeat 463..486 CDD:275380 9/22 (41%)
leucine-rich repeat 487..510 CDD:275380 8/24 (33%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..558 CDD:275380 8/22 (36%)
leucine-rich repeat 559..582 CDD:275380 9/25 (36%)
leucine-rich repeat 583..606 CDD:275380 5/22 (23%)
leucine-rich repeat 607..628 CDD:275380 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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