DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC3 and HOS3

DIOPT Version :9

Sequence 1:NP_651978.2 Gene:HDAC3 / 44446 FlyBaseID:FBgn0025825 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_015209.1 Gene:HOS3 / 855987 SGDID:S000006037 Length:697 Species:Saccharomyces cerevisiae


Alignment Length:472 Identity:83/472 - (17%)
Similarity:143/472 - (30%) Gaps:204/472 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 AMYTGASLEGAQKLNHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYH------PR 168
            :::.|.|.|...    |.:.:.|...|  ||......||||.:|:..:.|    :|.      ..
Yeast   172 SIFKGPSAEHIS----NRAFVAIRPPG--HHCHYGTPSGFCLLNNAHVAI----EYAYDTYNVTH 226

  Fly   169 VLYIDIDVHHGDGVQE------AFYLTDRVMTASFHKYGNYF--FPGTG--DMYEIGA---ESGR 220
            |:.:|.|:|||||.|:      .|...:....:|:..:|..|  ||..|  .|::|.:   ||| 
Yeast   227 VVVLDFDLHHGDGTQDICWKRAGFKPEEEPEDSSYDDFGKKFAEFPKVGYFSMHDINSFPTESG- 290

  Fly   221 YYSVNVPLKEGIDDQS----------------------------YFQVFKPIISAIMDFYRPT-- 255
                 ...||.|.:.|                            |...::.:.:...:|:|..  
Yeast   291 -----FATKENIKNASTCIMNSHDLNIWNIHLSKWTTEEEFNVLYRTKYRTLFAKADEFFRSAKL 350

  Fly   256 -----------AIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPT-------------- 295
                       .:|:..|.|:...::     .|.:.|        .:||||              
Yeast   351 EMNQQGRPFKGLVVISAGFDASEFEQ-----TSMQRH--------SVNVPTSFYTTFTKDALKLA 402

  Fly   296 --------LVVGGGGYT------------------------------------------------ 304
                    |.:..|||:                                                
Yeast   403 QMHCHGKVLSLMEGGYSDKAICSGVFAHLIGLQNQDWVKEWGSEQVVKEIVRGCKPAWKPYKTKR 467

  Fly   305 LRNVARCWTHETSLL-----------VDQDIENDLPATEYYDFFAPDFTLHPE---------INS 349
            .::|.|.|..|...|           :.:|..|..|:....     ..|:.|.         |.|
Yeast   468 AKDVIRIWAEEVIRLGRAMIPEFDDIIFKDAVNSAPSNSLL-----KATVEPASTSTIAQRIIRS 527

  Fly   350 RQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDLEELRSNREEASDPDVRISVADED 414
            .:.||:.:       |.::||..........:.:::  |..:::|.||...|           |.
Yeast   528 HRSNASPE-------KELHENKPRSTEKQEQREIRS--DTKVKQLSSNNRAA-----------ET 572

  Fly   415 KLVDAKNEFYDGDQDQD 431
            ::...:.||...|:|::
Yeast   573 QIPFLQQEFSSEDEDEE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC3NP_651978.2 HDAC3 4..388 CDD:212529 73/427 (17%)
HOS3NP_015209.1 HDAC_Hos3 47..435 CDD:212522 56/291 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0123
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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