Protein Alignment HDAC3 and HDA08

DIOPT Version :10

• Sequence 1: NP_651978.2
• Gene: HDAC3 / 44446
• FlyBaseID: FBgn0025825
• Length: 438
• Species: Drosophila melanogaster
• Sequence 2: NP_563817.1
• Gene: HDA08 / 837366
• AraportID: AT1G08460
• Length: 377
• Species: Arabidopsis thaliana
• Alignment Length: 343
• Identity: 91/343 - (26%)
• Similarity: 149/343 - (43%)
• Gaps: 49/343 - (14%)

  Fly     1 MTDRRVSYFYNA------------DVGNFHYGAG-------HPMKPQRLAVTHSLVMNYGLHKKM 46
            |...||..|::.            |.|   |..|       ||....|:....|::....:...:
plant     1 MVTNRVDVFWHEGMLRHDAVEGVFDTG---YDPGFLDVLEKHPENADRVRNMLSILRRGPIAPHV 62

  Fly    47 KIYRPYKASAQDMLRFHSDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAM 111
            ..:....|...::|.||:.|||..|.:......:|...|.| :::           .|.::...:
plant    63 NWFTGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGT-FMS-----------PGSWEAALL 115

  Fly   112 YTGASLEGAQKLNHNHSDIC---INWSGGLHHAKKFEASGFCYVNDIVIGILELLKYH--PRVLY 171
            ..|.:|...|.:...|..|.   :...|  ||::..:|.|:|::|:..:.:...|...  .||..
plant   116 AAGTTLSAMQHILDCHGKIAYALVRPPG--HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAV 178

  Fly   172 IDIDVHHGDGVQEAFYLTDRVMTASFH-KYGNY--FFPGTGDMYEIGAESGRYYSVNVPLKEGID 233
            ||||||:|:|..|.||.:|:|:|.|.| .:|::  ..|..|.:.|:|.:.|..|::||||..|..
plant   179 IDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTG 243

  Fly   234 DQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGH---GECVKFVKE--LNV 293
            |:.|......::...:..:.|..:||..|.||.|.|..|..||:..|:   |:.::.|.|  .:.
plant   244 DRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHG 308

  Fly   294 PTLVVGGGGYTLRNVARC 311
            ..|:|..|||.:...|.|
plant   309 RLLMVQEGGYHVTYAAYC 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HDAC3	NP_651978.2	HDAC3	4..388	CDD:212529	90/340 (26%)
HDA08	NP_563817.1	HDAC_classII_1	6..351	CDD:212521	89/338 (26%)