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Protein Alignment HDAC3 and AT5G61050
DIOPT Version :10
| Sequence 1: | NP_651978.2 |
Gene: | HDAC3 / 44446 |
FlyBaseID: | FBgn0025825 |
Length: | 438 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_200913.1 |
Gene: | AT5G61050 / 836226 |
AraportID: | AT5G61050 |
Length: | 252 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 126 |
Identity: | 28/126 - (22%) |
| Similarity: | 43/126 - (34%) |
Gaps: | 38/126 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 68 IAYLQQVTPQNIQCNSVAYTKYLAHF----------SVGEDCPVFDGLFDFCAMYTGASLEGAQK 122
:||...:|..|.|.:...|...|..| :|..|.|.|| .|....|..||:..
plant 112 VAYTNPLTNLNDQTHMCLYRITLEQFNDLLFQENELNVDSDYPFFD-----LAALRLAEKEGSIS 171
Fly 123 LNHNHSD------ICINWSG---------GLHHAKKFEASGF-------CYVNDIVIGILE 161
| ...|| :|:...| .|...:||::... .|.|.::.|:::
plant 172 L-QTASDSLYGNVVCLGKEGVIPILTLTCTLSVVEKFKSGEIPIRPPAKAYANTLIRGLVK 231
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HDAC3 | NP_651978.2 |
HDAC3 |
4..388 |
CDD:212529 |
28/126 (22%) |
| AT5G61050 | NP_200913.1 |
None |
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