Protein Alignment HDAC3 and HDA2

DIOPT Version :10

• Sequence 1: NP_651978.2
• Gene: HDAC3 / 44446
• FlyBaseID: FBgn0025825
• Length: 438
• Species: Drosophila melanogaster
• Sequence 2: NP_568480.2
• Gene: HDA2 / 832673
• AraportID: AT5G26040
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 331
• Identity: 80/331 - (24%)
• Similarity: 131/331 - (39%)
• Gaps: 37/331 - (11%)

  Fly     5 RVSYFYNA--DVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHSDEY 67
            :||..|::  |:........||....:.......:::.|..::..|..|.:||..|:|..||:.|
plant    73 KVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVVHSENY 137

  Fly    68 IAYLQ-QVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDIC 131
            :..|: ..|...|  ..||...:..:|.|.:..     |:.|.....|..|  |.|| .......
plant   138 LNSLKSSATVARI--TEVAPVAFFPNFLVQQKV-----LYPFRKQVGGTIL--AAKL-ATERGWA 192

  Fly   132 INWSGGLHHAKKFEASGFCYVNDIVIGI-LELLKYH-PRVLYIDIDVHHGDGVQEAFYLTDRVMT 194
            ||..||.||.......|||...||.:.| ...|:.. .||:.||:|.|.|:|.:......:||..
plant   193 INIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHETDLGDDNRVYI 257

  Fly   195 ASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVL 259
            ...:         ..::|.....:.|:....|.:..|.....|.:.....:......::|..::.
plant   258 LDMY---------NPEIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIY 313

  Fly   260 QCGADSLAGDRLGCFSLSTKG----HGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLV 320
            ..|.|.|.||.||...:|..|    ..:..:|.:|.|:|.:::..||| :::.||        ::
plant   314 NAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGY-MKSSAR--------VI 369

  Fly   321 DQDIEN 326
            ...|||
plant   370 ADSIEN 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HDAC3	NP_651978.2	HDAC3	4..388	CDD:212529	80/331 (24%)
HDA2	NP_568480.2	HDAC_classIV	93..376	CDD:212519	76/311 (24%)